scaffold8054 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8054 |
272 |
323 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
534 |
612 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
1516 |
3550 |
+ |
RS564 |
Unspecified |
| scaffold8054 |
3554 |
4367 |
+ |
RS3063 |
Unspecified |
| scaffold8054 |
4370 |
4761 |
- |
RS6789 |
Unspecified |
| scaffold8054 |
4696 |
4835 |
- |
RS6789 |
Unspecified |
| scaffold8054 |
5481 |
5510 |
+ |
(CACAAA)n |
Simple_repeat |
| scaffold8054 |
5737 |
5829 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
6400 |
7183 |
+ |
RS30 |
Unspecified |
| scaffold8054 |
7730 |
7795 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold8054 |
7803 |
7921 |
+ |
(TTATAC)n |
Simple_repeat |
| scaffold8054 |
8525 |
8575 |
+ |
(ATTAACTT)n |
Simple_repeat |
| scaffold8054 |
9167 |
9577 |
- |
PL143 |
Unspecified |
| scaffold8054 |
9796 |
9806 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
9807 |
9843 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold8054 |
10018 |
10057 |
+ |
(ATTTTAA)n |
Simple_repeat |
| scaffold8054 |
10164 |
10208 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold8054 |
10541 |
10600 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
10689 |
11773 |
+ |
RS150 |
Unspecified |
| scaffold8054 |
11157 |
11212 |
- |
RETROSAT5_I-int |
LTR/Gypsy |
| scaffold8054 |
11509 |
11603 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold8054 |
11773 |
12167 |
+ |
PL85 |
Unspecified |
| scaffold8054 |
12808 |
12892 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold8054 |
15915 |
16148 |
- |
PL111 |
Unspecified |
| scaffold8054 |
16817 |
16848 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
16817 |
16915 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
16839 |
16915 |
- |
RS398 |
Unspecified |
| scaffold8054 |
19157 |
19191 |
+ |
(TTTTCA)n |
Simple_repeat |
| scaffold8054 |
19192 |
19199 |
+ |
(ACTTTTC)n |
Simple_repeat |
| scaffold8054 |
19944 |
19997 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
20609 |
20698 |
+ |
OPHELIA3_HV |
LTR/Gypsy |
| scaffold8054 |
23479 |
23521 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
24551 |
24994 |
- |
PL670 |
Unspecified |
| scaffold8054 |
25669 |
25860 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold8054 |
26309 |
26374 |
+ |
(TATTAAC)n |
Simple_repeat |
| scaffold8054 |
26666 |
26742 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
26890 |
26926 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
26947 |
26965 |
+ |
(AC)n |
Simple_repeat |
| scaffold8054 |
27114 |
27175 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8054 |
27344 |
27405 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8054 |
27533 |
28137 |
- |
RS69 |
Unspecified |
| scaffold8054 |
28184 |
28223 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
28644 |
28704 |
+ |
(AATAGA)n |
Simple_repeat |
| scaffold8054 |
30831 |
31544 |
+ |
Mariner_MT |
DNA/TcMar-Stowaway |
| scaffold8054 |
32985 |
33023 |
+ |
GA-rich |
Low_complexity |
| scaffold8054 |
33279 |
33327 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
33516 |
33623 |
+ |
GA-rich |
Low_complexity |
| scaffold8054 |
34281 |
34331 |
+ |
A-rich |
Low_complexity |
| scaffold8054 |
34547 |
34584 |
+ |
(TATAATT)n |
Simple_repeat |
| scaffold8054 |
34699 |
34759 |
+ |
(AT)n |
Simple_repeat |
| scaffold8054 |
34699 |
35462 |
+ |
(AT)n |
Simple_repeat |
| scaffold8054 |
34729 |
35462 |
+ |
PL340 |
Unspecified |
| scaffold8054 |
36811 |
37583 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold8054 |
38632 |
38899 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold8054 |
40167 |
40467 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold8054 |
40369 |
40467 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold8054 |
41325 |
41416 |
+ |
(TTACAA)n |
Simple_repeat |
| scaffold8054 |
41399 |
41439 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8054 |
42815 |
42859 |
+ |
MuDR-18_VV |
DNA/MULE-MuDR |
| scaffold8054 |
44122 |
44552 |
+ |
RS458 |
Unspecified |
| scaffold8054 |
45167 |
45796 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold8054 |
45810 |
46766 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold8054 |
45830 |
46762 |
+ |
Copia-32-I_VV |
LTR/Copia |
| scaffold8054 |
47072 |
47110 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold8054 |
48016 |
48060 |
+ |
GYPSHAN_I_MT-int |
LTR/Gypsy |
| scaffold8054 |
48418 |
48511 |
+ |
GYPSHAN_I_MT-int |
LTR/Gypsy |
| scaffold8054 |
48581 |
48862 |
+ |
PIGY-LTR_PS |
LTR/Gypsy |