scaffold848 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold848 |
964 |
1005 |
+ |
A-rich |
Low_complexity |
| scaffold848 |
1393 |
1614 |
+ |
PL718 |
Unspecified |
| scaffold848 |
1790 |
1875 |
+ |
RS309 |
Unspecified |
| scaffold848 |
4141 |
4198 |
+ |
(ATGACA)n |
Simple_repeat |
| scaffold848 |
4547 |
4976 |
- |
RS81 |
Unspecified |
| scaffold848 |
5156 |
5211 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold848 |
5570 |
5636 |
+ |
(TTTATG)n |
Simple_repeat |
| scaffold848 |
7114 |
7484 |
- |
RS8491 |
Unspecified |
| scaffold848 |
7287 |
7585 |
- |
RS3065 |
Unspecified |
| scaffold848 |
7809 |
7919 |
- |
RS3585 |
Unspecified |
| scaffold848 |
8092 |
8566 |
- |
RS1275 |
Unspecified |
| scaffold848 |
8680 |
9105 |
- |
Copia16-VV_I-int |
LTR/Copia |
| scaffold848 |
9134 |
9528 |
+ |
RS2869 |
Unspecified |
| scaffold848 |
9455 |
9633 |
- |
RS6592 |
Unspecified |
| scaffold848 |
9501 |
9678 |
+ |
RS9182 |
Unspecified |
| scaffold848 |
10054 |
10617 |
- |
RS7468 |
Unspecified |
| scaffold848 |
10620 |
10665 |
- |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold848 |
10933 |
10972 |
- |
Copia-11_CP-I |
LTR/Copia |
| scaffold848 |
10933 |
11069 |
- |
Copia-11_CP-I |
LTR/Copia |
| scaffold848 |
10966 |
11069 |
- |
RS15391 |
Unspecified |
| scaffold848 |
10989 |
11383 |
+ |
RS2869 |
Unspecified |
| scaffold848 |
11310 |
11488 |
- |
RS6592 |
Unspecified |
| scaffold848 |
11356 |
11534 |
+ |
RS9182 |
Unspecified |
| scaffold848 |
11824 |
12664 |
+ |
RS658 |
Unspecified |
| scaffold848 |
12665 |
12731 |
+ |
(TG)n |
Simple_repeat |
| scaffold848 |
12878 |
13118 |
+ |
RS644 |
Unspecified |
| scaffold848 |
15932 |
15980 |
- |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold848 |
18011 |
18459 |
- |
PL266 |
Unspecified |
| scaffold848 |
18065 |
18461 |
- |
PL833 |
Unspecified |
| scaffold848 |
18467 |
19164 |
+ |
RS351 |
Unspecified |
| scaffold848 |
19166 |
19498 |
- |
RS1000 |
Unspecified |
| scaffold848 |
19483 |
19552 |
- |
RS3610 |
Unspecified |
| scaffold848 |
19724 |
19852 |
+ |
RS9958 |
Unspecified |
| scaffold848 |
19852 |
20059 |
- |
RS599 |
Unspecified |
| scaffold848 |
19852 |
20100 |
- |
PL707 |
Unspecified |
| scaffold848 |
22061 |
22084 |
+ |
(A)n |
Simple_repeat |
| scaffold848 |
22645 |
22681 |
+ |
A-rich |
Low_complexity |
| scaffold848 |
22970 |
23186 |
- |
RS880 |
Unspecified |
| scaffold848 |
23315 |
23423 |
+ |
RS2440 |
Unspecified |
| scaffold848 |
23915 |
23959 |
+ |
G-rich |
Low_complexity |
| scaffold848 |
24352 |
24376 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold848 |
24822 |
24862 |
+ |
(AATT)n |
Simple_repeat |
| scaffold848 |
25047 |
25822 |
+ |
HELMET |
RC/Helitron |
| scaffold848 |
25976 |
26755 |
+ |
HELMET3 |
RC/Helitron |
| scaffold848 |
26843 |
26984 |
+ |
Helitron3 |
RC/Helitron |
| scaffold848 |
27104 |
27996 |
+ |
Helitron1 |
RC/Helitron |
| scaffold848 |
27104 |
27842 |
+ |
Helitron1 |
RC/Helitron |
| scaffold848 |
27807 |
27996 |
- |
PL198 |
Unspecified |
| scaffold848 |
27984 |
28142 |
+ |
RS1233 |
Unspecified |
| scaffold848 |
30227 |
30284 |
+ |
(CTTATA)n |
Simple_repeat |
| scaffold848 |
32531 |
32552 |
+ |
(A)n |
Simple_repeat |
| scaffold848 |
33062 |
33088 |
+ |
(GATG)n |
Simple_repeat |
| scaffold848 |
33092 |
33148 |
+ |
(CATC)n |
Simple_repeat |
| scaffold848 |
33961 |
34017 |
+ |
(TTTTAG)n |
Simple_repeat |
| scaffold848 |
34477 |
34748 |
- |
RS1 |
Unspecified |
| scaffold848 |
35918 |
35965 |
+ |
A-rich |
Low_complexity |
| scaffold848 |
36494 |
36524 |
+ |
(A)n |
Simple_repeat |
| scaffold848 |
37676 |
38724 |
+ |
RAM12_I-int |
LTR/Gypsy |
| scaffold848 |
38904 |
38968 |
+ |
RAM12_I-int |
LTR/Gypsy |
| scaffold848 |
39909 |
39955 |
+ |
(TGTATG)n |
Simple_repeat |
| scaffold848 |
39956 |
40072 |
+ |
(GT)n |
Simple_repeat |
| scaffold848 |
40073 |
40085 |
+ |
(TGTATG)n |
Simple_repeat |
| scaffold848 |
40111 |
40157 |
+ |
(ATGT)n |
Simple_repeat |
| scaffold848 |
41026 |
41047 |
+ |
(GTT)n |
Simple_repeat |
| scaffold848 |
41580 |
41825 |
- |
RS777 |
Unspecified |
| scaffold848 |
43091 |
43136 |
+ |
(AGATGA)n |
Simple_repeat |
| scaffold848 |
44097 |
44178 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold848 |
44222 |
44372 |
- |
RS1347 |
Unspecified |
| scaffold848 |
44326 |
44433 |
- |
RS1347 |
Unspecified |
| scaffold848 |
44345 |
44678 |
- |
RS1220 |
Unspecified |
| scaffold848 |
44859 |
45029 |
- |
RS26 |
Unspecified |
| scaffold848 |
45211 |
45232 |
+ |
(TAA)n |
Simple_repeat |
| scaffold848 |
45401 |
45456 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold848 |
46213 |
46288 |
+ |
(AATCA)n |
Simple_repeat |
| scaffold848 |
46380 |
46515 |
- |
hAT-N16_ZM |
DNA/hAT-Ac |
| scaffold848 |
47490 |
47795 |
+ |
PL187 |
Unspecified |
| scaffold848 |
47931 |
47981 |
+ |
A-rich |
Low_complexity |
| scaffold848 |
48933 |
49110 |
+ |
BvL1 |
LINE/L1 |
| scaffold848 |
50057 |
50115 |
- |
MuDR-N1_ZM |
DNA/MULE-MuDR |
| scaffold848 |
50062 |
50123 |
+ |
Copia-47_VV-I |
LTR/Copia |
| scaffold848 |
50219 |
50323 |
- |
MuDR-N1_ZM |
DNA/MULE-MuDR |
| scaffold848 |
50270 |
50377 |
+ |
Copia-47_VV-I |
LTR/Copia |
| scaffold848 |
50429 |
50496 |
- |
RS8690 |
Unspecified |
| scaffold848 |
50499 |
50535 |
- |
RS8690 |
Unspecified |
| scaffold848 |
50766 |
50824 |
- |
MuDR-N1_ZM |
DNA/MULE-MuDR |
| scaffold848 |
50771 |
50832 |
+ |
Copia-47_VV-I |
LTR/Copia |
| scaffold848 |
51482 |
51537 |
+ |
G-rich |
Low_complexity |
| scaffold848 |
51609 |
51657 |
- |
RS8690 |
Unspecified |
| scaffold848 |
51657 |
51721 |
- |
PL655 |
Unspecified |
| scaffold848 |
51940 |
52198 |
- |
RS356 |
Unspecified |
| scaffold848 |
52490 |
52749 |
+ |
Copia40-PTR_I-int |
LTR/Copia |
| scaffold848 |
52860 |
53399 |
+ |
RS1447 |
Unspecified |
| scaffold848 |
53371 |
53725 |
+ |
RS1447 |
Unspecified |
| scaffold848 |
53722 |
53821 |
- |
PL515 |
Unspecified |
| scaffold848 |
53822 |
53966 |
- |
PL674 |
Unspecified |
| scaffold848 |
54324 |
54354 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold848 |
54888 |
55449 |
- |
PL716 |
Unspecified |
| scaffold848 |
55068 |
55598 |
- |
PL962 |
Unspecified |
| scaffold848 |
55326 |
55929 |
+ |
PL239 |
Unspecified |
| scaffold848 |
55608 |
56071 |
+ |
PL423 |
Unspecified |
| scaffold848 |
55706 |
56329 |
+ |
RS13 |
Unspecified |
| scaffold848 |
56410 |
56452 |
+ |
(CAATCT)n |
Simple_repeat |
| scaffold848 |
56614 |
57060 |
- |
RS403 |
Unspecified |
| scaffold848 |
57251 |
57343 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold848 |
57347 |
57482 |
+ |
(TATTCG)n |
Simple_repeat |
| scaffold848 |
57908 |
57985 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold848 |
58067 |
58512 |
- |
PL963 |
Unspecified |
| scaffold848 |
58540 |
58575 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold848 |
59479 |
59536 |
+ |
(TG)n |
Simple_repeat |
| scaffold848 |
59537 |
59547 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold848 |
59838 |
59882 |
+ |
A-rich |
Low_complexity |
| scaffold848 |
60499 |
60613 |
- |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold848 |
110030 |
110249 |
- |
RS568 |
Unspecified |