scaffold898 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold898 |
18 |
56 |
- |
Gypsy-80-I_ZM |
LTR/Gypsy |
| scaffold898 |
290 |
308 |
+ |
(GTG)n |
Simple_repeat |
| scaffold898 |
1910 |
2059 |
- |
SHACOP15_LTR_MT |
LTR/Copia |
| scaffold898 |
6543 |
6605 |
+ |
(CATAA)n |
Simple_repeat |
| scaffold898 |
9135 |
9230 |
+ |
Copia-69_GM-LTR |
LTR/Copia |
| scaffold898 |
11186 |
11213 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold898 |
11802 |
11856 |
+ |
A-rich |
Low_complexity |
| scaffold898 |
14317 |
14974 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold898 |
15104 |
18201 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold898 |
18787 |
18826 |
+ |
(A)n |
Simple_repeat |
| scaffold898 |
18929 |
19006 |
+ |
(A)n |
Simple_repeat |
| scaffold898 |
19015 |
19084 |
+ |
(CCA)n |
Simple_repeat |
| scaffold898 |
19673 |
19981 |
- |
RS1183 |
Unspecified |
| scaffold898 |
20377 |
20419 |
+ |
A-rich |
Low_complexity |
| scaffold898 |
20704 |
21746 |
- |
PL670 |
Unspecified |
| scaffold898 |
21747 |
23190 |
+ |
Ogre-MT3_I-int |
LTR/Gypsy |
| scaffold898 |
22972 |
23190 |
+ |
Ogre-MT3_I-int |
LTR/Gypsy |
| scaffold898 |
23793 |
23832 |
+ |
Gypsy-120_SB-I |
LTR/Gypsy |
| scaffold898 |
23794 |
23838 |
- |
RLG_scTat_2_1-I |
LTR/Gypsy |
| scaffold898 |
24022 |
24057 |
+ |
(AGAAC)n |
Simple_repeat |
| scaffold898 |
24167 |
24205 |
+ |
(TCATTA)n |
Simple_repeat |
| scaffold898 |
25536 |
26354 |
+ |
RS1894 |
Unspecified |
| scaffold898 |
27420 |
27502 |
+ |
A-rich |
Low_complexity |
| scaffold898 |
28898 |
28919 |
+ |
(CAA)n |
Simple_repeat |
| scaffold898 |
30325 |
30373 |
+ |
RS731 |
Unspecified |
| scaffold898 |
30388 |
30712 |
+ |
RS731 |
Unspecified |
| scaffold898 |
31002 |
31236 |
+ |
RS1061 |
Unspecified |
| scaffold898 |
34696 |
34801 |
+ |
PL515 |
Unspecified |
| scaffold898 |
34799 |
35563 |
- |
RS220 |
Unspecified |
| scaffold898 |
35824 |
37039 |
- |
RS242 |
Unspecified |
| scaffold898 |
37498 |
37843 |
+ |
RS401 |
Unspecified |
| scaffold898 |
38112 |
38141 |
+ |
(A)n |
Simple_repeat |
| scaffold898 |
38184 |
38226 |
- |
Gypsy-140_SBi-I |
LTR/Gypsy |
| scaffold898 |
38206 |
38232 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold898 |
38266 |
39155 |
- |
RS220 |
Unspecified |
| scaffold898 |
39416 |
39622 |
- |
RS242 |
Unspecified |
| scaffold898 |
39870 |
39951 |
+ |
(CAA)n |
Simple_repeat |
| scaffold898 |
40163 |
41240 |
- |
RS265 |
Unspecified |
| scaffold898 |
41580 |
41646 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold898 |
41844 |
42070 |
- |
RS267 |
Unspecified |
| scaffold898 |
42055 |
42083 |
+ |
RS2463 |
Unspecified |
| scaffold898 |
42229 |
42282 |
+ |
(A)n |
Simple_repeat |
| scaffold898 |
42540 |
42868 |
+ |
RS2463 |
Unspecified |
| scaffold898 |
42856 |
43082 |
- |
RS267 |
Unspecified |
| scaffold898 |
43534 |
44091 |
- |
PL782 |
Unspecified |
| scaffold898 |
44084 |
44293 |
+ |
RS12936 |
Unspecified |
| scaffold898 |
44311 |
44327 |
+ |
(A)n |
Simple_repeat |
| scaffold898 |
44787 |
44827 |
+ |
(ATCGAA)n |
Simple_repeat |
| scaffold898 |
44966 |
45061 |
+ |
(TA)n |
Simple_repeat |
| scaffold898 |
45238 |
45269 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold898 |
45333 |
45361 |
+ |
(AGT)n |
Simple_repeat |
| scaffold898 |
46234 |
46533 |
- |
RS326 |
Unspecified |
| scaffold898 |
46866 |
47073 |
+ |
RS12936 |
Unspecified |
| scaffold898 |
47091 |
47108 |
+ |
(A)n |
Simple_repeat |
| scaffold898 |
47555 |
47593 |
+ |
A-rich |
Low_complexity |
| scaffold898 |
47780 |
47807 |
+ |
(T)n |
Simple_repeat |
| scaffold898 |
48239 |
48265 |
+ |
(TCA)n |
Simple_repeat |
| scaffold898 |
49532 |
49600 |
+ |
(GAACGAA)n |
Simple_repeat |
| scaffold898 |
50095 |
50582 |
- |
RS265 |
Unspecified |
| scaffold898 |
51031 |
51071 |
+ |
(AACA)n |
Simple_repeat |
| scaffold898 |
51973 |
52051 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold898 |
52670 |
52735 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold898 |
53398 |
53504 |
+ |
MuDR-4N_Mad |
DNA/MULE-MuDR |
| scaffold898 |
53577 |
53624 |
+ |
A-rich |
Low_complexity |
| scaffold898 |
53738 |
53770 |
+ |
(TCA)n |
Simple_repeat |
| scaffold898 |
53930 |
54620 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold898 |
54777 |
55394 |
+ |
RS661 |
Unspecified |
| scaffold898 |
54861 |
55489 |
+ |
RS1207 |
Unspecified |
| scaffold898 |
55726 |
55889 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold898 |
55953 |
56000 |
- |
Gypsy-39_PT-I |
LTR/Gypsy |
| scaffold898 |
56509 |
56535 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold898 |
56799 |
56841 |
+ |
GYPSODE1_LTR |
LTR/Gypsy |
| scaffold898 |
57009 |
57075 |
+ |
(TCCCTCA)n |
Simple_repeat |
| scaffold898 |
58865 |
58917 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold898 |
59399 |
59924 |
+ |
RS7 |
Unspecified |
| scaffold898 |
59934 |
60072 |
- |
RS1686 |
Unspecified |
| scaffold898 |
61512 |
61586 |
- |
OPHELIA3_HV |
LTR/Gypsy |
| scaffold898 |
62981 |
63093 |
+ |
A-rich |
Low_complexity |
| scaffold898 |
63324 |
63382 |
+ |
(CAT)n |
Simple_repeat |
| scaffold898 |
63542 |
64217 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold898 |
64319 |
64836 |
+ |
RS1930 |
Unspecified |
| scaffold898 |
64388 |
65035 |
+ |
RS661 |
Unspecified |
| scaffold898 |
64494 |
65141 |
+ |
RS1207 |
Unspecified |
| scaffold898 |
65376 |
65832 |
- |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold898 |
66168 |
66198 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold898 |
67374 |
67413 |
+ |
A-rich |
Low_complexity |
| scaffold898 |
67599 |
67692 |
+ |
RS184 |
Unspecified |
| scaffold898 |
68274 |
70052 |
+ |
RS184 |
Unspecified |
| scaffold898 |
70151 |
70226 |
+ |
DEL_LH_I-int |
LTR/Gypsy |
| scaffold898 |
70391 |
70433 |
+ |
GYPSODE1_LTR |
LTR/Gypsy |
| scaffold898 |
70601 |
70667 |
+ |
(TCCCTCA)n |
Simple_repeat |
| scaffold898 |
70996 |
71037 |
+ |
(TGT)n |
Simple_repeat |
| scaffold898 |
72240 |
72265 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold898 |
73150 |
73175 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold898 |
73570 |
73655 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold898 |
73882 |
74050 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold898 |
74644 |
74876 |
- |
RS6214 |
Unspecified |
| scaffold898 |
75111 |
75709 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold898 |
75967 |
78578 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold898 |
78612 |
79662 |
+ |
Gypsy-2_Pru-I |
LTR/Gypsy |
| scaffold898 |
78612 |
80240 |
+ |
Gypsy-2_Pru-I |
LTR/Gypsy |
| scaffold898 |
79581 |
80240 |
- |
RS6520 |
Unspecified |
| scaffold898 |
98688 |
98822 |
+ |
PL670 |
Unspecified |