scaffold9178 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold9178 |
1496 |
1521 |
+ |
(T)n |
Simple_repeat |
| scaffold9178 |
2690 |
2799 |
+ |
RS9121 |
Unspecified |
| scaffold9178 |
8170 |
8218 |
+ |
A-rich |
Low_complexity |
| scaffold9178 |
8438 |
8629 |
+ |
RS11407 |
Unspecified |
| scaffold9178 |
9024 |
9142 |
+ |
RS11717 |
Unspecified |
| scaffold9178 |
10213 |
10374 |
+ |
RS6912 |
Unspecified |
| scaffold9178 |
10393 |
10444 |
+ |
RS4550 |
Unspecified |
| scaffold9178 |
10435 |
10493 |
+ |
RS1259 |
Unspecified |
| scaffold9178 |
10488 |
10624 |
+ |
RS594 |
Unspecified |
| scaffold9178 |
10601 |
10873 |
+ |
RS1259 |
Unspecified |
| scaffold9178 |
10897 |
10933 |
+ |
RS1258 |
Unspecified |
| scaffold9178 |
10927 |
11057 |
+ |
RS4867 |
Unspecified |
| scaffold9178 |
11155 |
11321 |
+ |
RS4771 |
Unspecified |
| scaffold9178 |
11416 |
11659 |
- |
RS4 |
Unspecified |
| scaffold9178 |
11992 |
12103 |
- |
PL820 |
Unspecified |
| scaffold9178 |
13137 |
13328 |
+ |
RS11407 |
Unspecified |
| scaffold9178 |
17239 |
17365 |
+ |
RS16106 |
Unspecified |
| scaffold9178 |
17627 |
17861 |
+ |
RS4 |
Unspecified |
| scaffold9178 |
17874 |
18473 |
+ |
PL221 |
Unspecified |
| scaffold9178 |
18263 |
18398 |
- |
GmOgre_I-int |
LTR/Gypsy |
| scaffold9178 |
18439 |
18487 |
+ |
PL648 |
Unspecified |
| scaffold9178 |
19018 |
19118 |
+ |
(TACAAT)n |
Simple_repeat |
| scaffold9178 |
20272 |
20321 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold9178 |
20575 |
20869 |
- |
RS7374 |
Unspecified |
| scaffold9178 |
20579 |
20819 |
+ |
RS586 |
Unspecified |
| scaffold9178 |
20922 |
21080 |
+ |
RS152 |
Unspecified |
| scaffold9178 |
21088 |
21150 |
- |
RS503 |
Unspecified |
| scaffold9178 |
21325 |
21357 |
+ |
A-rich |
Low_complexity |
| scaffold9178 |
21457 |
21501 |
+ |
(T)n |
Simple_repeat |
| scaffold9178 |
21664 |
21698 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold9178 |
21711 |
21735 |
+ |
(A)n |
Simple_repeat |
| scaffold9178 |
22476 |
22504 |
+ |
(CAC)n |
Simple_repeat |
| scaffold9178 |
22753 |
22786 |
+ |
GA-rich |
Low_complexity |
| scaffold9178 |
23127 |
23234 |
+ |
(CAC)n |
Simple_repeat |
| scaffold9178 |
24978 |
24999 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold9178 |
26262 |
26318 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold9178 |
29675 |
29784 |
+ |
(AAC)n |
Simple_repeat |
| scaffold9178 |
30017 |
30042 |
+ |
(CAA)n |
Simple_repeat |
| scaffold9178 |
30632 |
30666 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9178 |
30741 |
30998 |
- |
RS1 |
Unspecified |
| scaffold9178 |
30968 |
31005 |
+ |
RS1 |
Unspecified |
| scaffold9178 |
32052 |
32100 |
- |
Copia-105_Mad-I |
LTR/Copia |
| scaffold9178 |
32460 |
32522 |
+ |
A-rich |
Low_complexity |
| scaffold9178 |
33177 |
33198 |
+ |
(T)n |
Simple_repeat |
| scaffold9178 |
33282 |
33319 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9178 |
33528 |
33682 |
- |
RS133 |
Unspecified |
| scaffold9178 |
33752 |
33788 |
+ |
(T)n |
Simple_repeat |
| scaffold9178 |
36539 |
36633 |
+ |
(TG)n |
Simple_repeat |
| scaffold9178 |
36812 |
37087 |
- |
RS586 |
Unspecified |
| scaffold9178 |
37191 |
37319 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold9178 |
37359 |
37442 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold9178 |
38710 |
38726 |
+ |
(A)n |
Simple_repeat |
| scaffold9178 |
39500 |
39702 |
+ |
RS3948 |
Unspecified |
| scaffold9178 |
39599 |
39827 |
+ |
(ATTAATT)n |
Simple_repeat |
| scaffold9178 |
39755 |
39827 |
+ |
(ATTAATT)n |
Simple_repeat |
| scaffold9178 |
40897 |
41040 |
+ |
RS115 |
Unspecified |
| scaffold9178 |
41220 |
41248 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold9178 |
43382 |
43535 |
- |
RS178 |
Unspecified |
| scaffold9178 |
43545 |
43656 |
- |
RS2620 |
Unspecified |
| scaffold9178 |
43671 |
43819 |
+ |
RS6000 |
Unspecified |
| scaffold9178 |
43977 |
44065 |
+ |
tRNASAT-1_ZM |
Satellite |
| scaffold9178 |
44068 |
44115 |
+ |
(TATTACA)n |
Simple_repeat |
| scaffold9178 |
44777 |
45455 |
+ |
RS12423 |
Unspecified |
| scaffold9178 |
45471 |
45644 |
- |
RS3344 |
Unspecified |
| scaffold9178 |
46026 |
46704 |
+ |
RS12423 |
Unspecified |
| scaffold9178 |
47102 |
47323 |
- |
RS4 |
Unspecified |
| scaffold9178 |
47535 |
47572 |
+ |
(TACTCCG)n |
Simple_repeat |
| scaffold9178 |
47652 |
47833 |
- |
RS178 |
Unspecified |
| scaffold9178 |
48014 |
48190 |
+ |
RS952 |
Unspecified |
| scaffold9178 |
48514 |
48702 |
+ |
RS14067 |
Unspecified |
| scaffold9178 |
49342 |
49624 |
- |
RS3344 |
Unspecified |
| scaffold9178 |
49715 |
49745 |
+ |
(TAAAT)n |
Simple_repeat |
| scaffold9178 |
49881 |
49974 |
- |
RS16382 |
Unspecified |
| scaffold9178 |
50015 |
50105 |
- |
RS17 |
Unspecified |
| scaffold9178 |
50106 |
50208 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold9178 |
50453 |
50503 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9178 |
50688 |
50841 |
+ |
RS952 |
Unspecified |
| scaffold9178 |
51262 |
51450 |
+ |
RS14067 |
Unspecified |
| scaffold9178 |
53281 |
53309 |
+ |
(AATAC)n |
Simple_repeat |
| scaffold9178 |
53401 |
53461 |
+ |
(TTGTAT)n |
Simple_repeat |
| scaffold9178 |
53781 |
53836 |
+ |
A-rich |
Low_complexity |
| scaffold9178 |
53992 |
54279 |
+ |
PL688 |
Unspecified |
| scaffold9178 |
53992 |
54321 |
+ |
RS2543 |
Unspecified |
| scaffold9178 |
54317 |
54375 |
+ |
(AATA)n |
Simple_repeat |
| scaffold9178 |
54600 |
54791 |
- |
PL688 |
Unspecified |
| scaffold9178 |
54694 |
54810 |
+ |
PL523 |
Unspecified |
| scaffold9178 |
55561 |
55672 |
- |
RS2620 |
Unspecified |
| scaffold9178 |
55946 |
56019 |
+ |
tRNASAT-1_ZM |
Satellite |
| scaffold9178 |
56018 |
56155 |
- |
RS639 |
Unspecified |
| scaffold9178 |
57811 |
57904 |
+ |
tRNASAT-1_ZM |
Satellite |
| scaffold9178 |
58629 |
59044 |
+ |
RS12423 |
Unspecified |
| scaffold9178 |
59125 |
59209 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold9178 |
59229 |
59473 |
+ |
RS12423 |
Unspecified |
| scaffold9178 |
59833 |
60102 |
- |
RS82 |
Unspecified |
| scaffold9178 |
60110 |
60182 |
+ |
A-rich |
Low_complexity |
| scaffold9178 |
60707 |
60737 |
+ |
A-rich |
Low_complexity |
| scaffold9178 |
60995 |
61086 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold9178 |
61291 |
61328 |
+ |
(TACTCCG)n |
Simple_repeat |
| scaffold9178 |
61643 |
61797 |
+ |
RS952 |
Unspecified |
| scaffold9178 |
62173 |
62360 |
+ |
RS14067 |
Unspecified |
| scaffold9178 |
64605 |
64679 |
+ |
(TATTATA)n |
Simple_repeat |
| scaffold9178 |
64781 |
64809 |
+ |
(A)n |
Simple_repeat |
| scaffold9178 |
65138 |
65154 |
+ |
(T)n |
Simple_repeat |
| scaffold9178 |
65553 |
65581 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9178 |
66000 |
66215 |
+ |
RS1526 |
Unspecified |
| scaffold9178 |
66088 |
66245 |
+ |
RS2535 |
Unspecified |
| scaffold9178 |
66718 |
66751 |
+ |
(A)n |
Simple_repeat |
| scaffold9178 |
67199 |
67238 |
+ |
(ATTAATT)n |
Simple_repeat |
| scaffold9178 |
67351 |
67442 |
+ |
hAT-9_SBi |
DNA/hAT-Tag1 |
| scaffold9178 |
67853 |
67889 |
+ |
(TGTCCG)n |
Simple_repeat |
| scaffold9178 |
68182 |
68502 |
- |
RS748 |
Unspecified |
| scaffold9178 |
69052 |
69126 |
+ |
tRNASAT-1_ZM |
Satellite |
| scaffold9178 |
70089 |
70136 |
+ |
(TA)n |
Simple_repeat |
| scaffold9178 |
71740 |
71776 |
+ |
RS18111 |
Unspecified |
| scaffold9178 |
74028 |
74070 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold9178 |
74241 |
74315 |
+ |
A-rich |
Low_complexity |
| scaffold9178 |
74769 |
75050 |
+ |
RS1263 |
Unspecified |
| scaffold9178 |
75075 |
75092 |
+ |
(A)n |
Simple_repeat |
| scaffold9178 |
75913 |
75946 |
+ |
(ATTCTTT)n |
Simple_repeat |
| scaffold9178 |
76696 |
76755 |
+ |
(AATT)n |
Simple_repeat |
| scaffold9178 |
76769 |
76798 |
+ |
(AT)n |
Simple_repeat |
| scaffold9178 |
78958 |
79020 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9178 |
79021 |
79043 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9178 |
80140 |
80196 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold9178 |
80377 |
80420 |
+ |
(ATTTTA)n |
Simple_repeat |
| scaffold9178 |
82260 |
82416 |
+ |
RS17999 |
Unspecified |
| scaffold9178 |
82478 |
82543 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold9178 |
82544 |
82596 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold9178 |
82643 |
82677 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold9178 |
82718 |
83093 |
+ |
PL782 |
Unspecified |
| scaffold9178 |
83691 |
83724 |
+ |
(ATAG)n |
Simple_repeat |
| scaffold9178 |
87456 |
87631 |
+ |
RS179 |
Unspecified |
| scaffold9178 |
89663 |
89719 |
- |
LTR-2_MX-LTR |
LTR |
| scaffold9178 |
90081 |
90118 |
+ |
(A)n |
Simple_repeat |
| scaffold9178 |
90366 |
90527 |
+ |
PL271 |
Unspecified |
| scaffold9178 |
90527 |
90882 |
- |
PL721 |
Unspecified |
| scaffold9178 |
91626 |
92153 |
- |
PL283 |
Unspecified |
| scaffold9178 |
92152 |
92400 |
- |
RS26 |
Unspecified |
| scaffold9178 |
92406 |
92498 |
+ |
PL513 |
Unspecified |
| scaffold9178 |
92462 |
92662 |
- |
RS15695 |
Unspecified |
| scaffold9178 |
92494 |
92856 |
- |
RS539 |
Unspecified |
| scaffold9178 |
92609 |
93198 |
- |
RS204 |
Unspecified |
| scaffold9178 |
93045 |
93220 |
+ |
RS3110 |
Unspecified |
| scaffold9178 |
93449 |
93480 |
+ |
(T)n |
Simple_repeat |
| scaffold9178 |
95026 |
95269 |
- |
RS4 |
Unspecified |
| scaffold9178 |
96201 |
96224 |
+ |
(AT)n |
Simple_repeat |
| scaffold9178 |
96527 |
96555 |
+ |
(TATT)n |
Simple_repeat |
| scaffold9178 |
96562 |
96605 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9178 |
96744 |
96870 |
+ |
RS1172 |
Unspecified |
| scaffold9178 |
96759 |
96917 |
- |
RS11189 |
Unspecified |
| scaffold9178 |
97547 |
97566 |
+ |
(T)n |
Simple_repeat |
| scaffold9178 |
97889 |
98047 |
- |
RS11189 |
Unspecified |
| scaffold9178 |
98214 |
98254 |
+ |
(T)n |
Simple_repeat |
| scaffold9178 |
99142 |
99183 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9178 |
99530 |
99561 |
+ |
(TATT)n |
Simple_repeat |
| scaffold9178 |
100065 |
100197 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold9178 |
101054 |
101570 |
+ |
PL28 |
Unspecified |
| scaffold9178 |
102653 |
102687 |
+ |
A-rich |
Low_complexity |
| scaffold9178 |
102820 |
102993 |
+ |
RS38 |
Unspecified |
| scaffold9178 |
104738 |
104783 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold9178 |
105202 |
105240 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9178 |
105865 |
105897 |
+ |
(TAT)n |
Simple_repeat |