scaffold9634 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold9634 |
188 |
239 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold9634 |
868 |
1163 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold9634 |
1207 |
1322 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold9634 |
1291 |
2004 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold9634 |
2169 |
2293 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold9634 |
2488 |
2828 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold9634 |
2828 |
4807 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold9634 |
2829 |
3861 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold9634 |
4056 |
4788 |
- |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold9634 |
4872 |
5192 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold9634 |
4877 |
5126 |
- |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold9634 |
6332 |
6361 |
+ |
(AAG)n |
Simple_repeat |
| scaffold9634 |
6360 |
7274 |
+ |
PL475 |
Unspecified |
| scaffold9634 |
8977 |
9126 |
- |
PL267 |
Unspecified |
| scaffold9634 |
9990 |
10172 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold9634 |
10516 |
10567 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold9634 |
10614 |
10653 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold9634 |
10908 |
11183 |
+ |
PL194 |
Unspecified |
| scaffold9634 |
11175 |
11453 |
+ |
RS13058 |
Unspecified |
| scaffold9634 |
11654 |
12142 |
+ |
PL6 |
Unspecified |
| scaffold9634 |
12148 |
12202 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold9634 |
12349 |
12648 |
- |
RS513 |
Unspecified |
| scaffold9634 |
12849 |
12905 |
+ |
A-rich |
Low_complexity |
| scaffold9634 |
13222 |
13393 |
+ |
RS463 |
Unspecified |
| scaffold9634 |
14544 |
14572 |
+ |
G-rich |
Low_complexity |
| scaffold9634 |
14836 |
14888 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold9634 |
15019 |
15397 |
+ |
RS463 |
Unspecified |
| scaffold9634 |
15711 |
16064 |
- |
PL582 |
Unspecified |
| scaffold9634 |
18894 |
19139 |
+ |
RS4 |
Unspecified |
| scaffold9634 |
19777 |
20039 |
+ |
PL294 |
Unspecified |
| scaffold9634 |
20386 |
20433 |
+ |
(GAT)n |
Simple_repeat |
| scaffold9634 |
20674 |
20739 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9634 |
20758 |
20857 |
- |
RS4956 |
Unspecified |
| scaffold9634 |
22033 |
22175 |
- |
RS3756 |
Unspecified |
| scaffold9634 |
22060 |
22179 |
- |
RS15316 |
Unspecified |
| scaffold9634 |
22202 |
22227 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold9634 |
22267 |
22449 |
- |
RS4956 |
Unspecified |
| scaffold9634 |
22438 |
22549 |
+ |
PL370 |
Unspecified |
| scaffold9634 |
22653 |
22702 |
+ |
A-rich |
Low_complexity |
| scaffold9634 |
22940 |
23077 |
+ |
LSU-rRNA_Ath |
rRNA |
| scaffold9634 |
23078 |
23384 |
- |
RS2543 |
Unspecified |
| scaffold9634 |
23534 |
23571 |
+ |
(AGATAA)n |
Simple_repeat |
| scaffold9634 |
23935 |
24055 |
- |
RS14670 |
Unspecified |
| scaffold9634 |
24058 |
24091 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold9634 |
24297 |
24356 |
+ |
A-rich |
Low_complexity |
| scaffold9634 |
25458 |
26063 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold9634 |
26597 |
26623 |
+ |
(A)n |
Simple_repeat |
| scaffold9634 |
27374 |
27430 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9634 |
27497 |
27551 |
+ |
(TGT)n |
Simple_repeat |
| scaffold9634 |
27664 |
27950 |
+ |
PL469 |
Unspecified |
| scaffold9634 |
28397 |
29316 |
- |
RS1011 |
Unspecified |
| scaffold9634 |
29514 |
29574 |
+ |
(AC)n |
Simple_repeat |
| scaffold9634 |
29721 |
29740 |
+ |
(G)n |
Simple_repeat |
| scaffold9634 |
29740 |
30400 |
- |
PL180 |
Unspecified |
| scaffold9634 |
30495 |
30548 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9634 |
30668 |
30736 |
+ |
A-rich |
Low_complexity |
| scaffold9634 |
31319 |
31357 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold9634 |
31725 |
31757 |
+ |
(T)n |
Simple_repeat |
| scaffold9634 |
31725 |
32262 |
+ |
(T)n |
Simple_repeat |
| scaffold9634 |
31746 |
32262 |
- |
RS2618 |
Unspecified |
| scaffold9634 |
33257 |
33279 |
+ |
(A)n |
Simple_repeat |
| scaffold9634 |
34484 |
34540 |
+ |
RS2827 |
Unspecified |
| scaffold9634 |
34595 |
35188 |
+ |
PL477 |
Unspecified |
| scaffold9634 |
35366 |
35521 |
- |
RS79 |
Unspecified |
| scaffold9634 |
35523 |
35699 |
- |
RS371 |
Unspecified |
| scaffold9634 |
36032 |
36294 |
- |
RS1 |
Unspecified |
| scaffold9634 |
36197 |
36314 |
+ |
RS15138 |
Unspecified |
| scaffold9634 |
36686 |
36785 |
+ |
RS1172 |
Unspecified |
| scaffold9634 |
36952 |
37136 |
- |
RS581 |
Unspecified |
| scaffold9634 |
38004 |
38267 |
- |
RS356 |
Unspecified |
| scaffold9634 |
38265 |
38570 |
- |
PL831 |
Unspecified |
| scaffold9634 |
40302 |
40342 |
+ |
(TATT)n |
Simple_repeat |
| scaffold9634 |
44171 |
44207 |
+ |
A-rich |
Low_complexity |
| scaffold9634 |
44298 |
44321 |
+ |
(A)n |
Simple_repeat |
| scaffold9634 |
48831 |
49019 |
+ |
RS7623 |
Unspecified |
| scaffold9634 |
49839 |
49891 |
+ |
G-rich |
Low_complexity |
| scaffold9634 |
50383 |
50433 |
+ |
A-rich |
Low_complexity |
| scaffold9634 |
53471 |
53499 |
+ |
A-rich |
Low_complexity |
| scaffold9634 |
53803 |
53977 |
- |
RS179 |
Unspecified |
| scaffold9634 |
54135 |
54591 |
- |
RS919 |
Unspecified |
| scaffold9634 |
54601 |
54941 |
- |
PL599 |
Unspecified |
| scaffold9634 |
54942 |
55008 |
- |
RS589 |
Unspecified |
| scaffold9634 |
54987 |
55224 |
- |
RS589 |
Unspecified |
| scaffold9634 |
55216 |
55505 |
+ |
(TATA)n |
Simple_repeat |
| scaffold9634 |
55458 |
55505 |
+ |
(TATA)n |
Simple_repeat |
| scaffold9634 |
56166 |
56297 |
+ |
(T)n |
Simple_repeat |
| scaffold9634 |
56274 |
56297 |
+ |
(T)n |
Simple_repeat |
| scaffold9634 |
56378 |
56419 |
+ |
(TCAATT)n |
Simple_repeat |
| scaffold9634 |
56912 |
57018 |
+ |
(CAC)n |
Simple_repeat |
| scaffold9634 |
57030 |
57096 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9634 |
57131 |
57204 |
+ |
(TGATTT)n |
Simple_repeat |
| scaffold9634 |
57206 |
57452 |
+ |
(TTG)n |
Simple_repeat |
| scaffold9634 |
57460 |
57714 |
- |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold9634 |
57556 |
57737 |
+ |
(TAG)n |
Simple_repeat |
| scaffold9634 |
57933 |
58044 |
+ |
EnSpm-13_VV |
DNA/CMC-EnSpm |
| scaffold9634 |
58169 |
58205 |
+ |
(ATGTGTT)n |
Simple_repeat |
| scaffold9634 |
58802 |
59443 |
+ |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold9634 |
59460 |
59535 |
+ |
(TA)n |
Simple_repeat |
| scaffold9634 |
59688 |
60947 |
+ |
cacta |
cacta(TransposonPSI) |
| scaffold9634 |
59688 |
59906 |
+ |
cacta |
cacta(TransposonPSI) |
| scaffold9634 |
59692 |
59750 |
+ |
EnSpm-4_STu |
DNA/CMC-EnSpm |
| scaffold9634 |
59859 |
60947 |
- |
RS3063 |
Unspecified |
| scaffold9634 |
60364 |
61174 |
- |
PL921 |
Unspecified |