scaffold9772 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold9772 |
319 |
444 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold9772 |
550 |
614 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold9772 |
913 |
1557 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold9772 |
1768 |
2174 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold9772 |
2201 |
3695 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold9772 |
5071 |
5099 |
+ |
(A)n |
Simple_repeat |
| scaffold9772 |
5122 |
5183 |
+ |
(GCC)n |
Simple_repeat |
| scaffold9772 |
5577 |
6537 |
+ |
RS10263 |
Unspecified |
| scaffold9772 |
6942 |
7184 |
+ |
RS2694 |
Unspecified |
| scaffold9772 |
7397 |
7419 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9772 |
7526 |
7571 |
+ |
A-rich |
Low_complexity |
| scaffold9772 |
7641 |
7855 |
- |
RS1689 |
Unspecified |
| scaffold9772 |
7854 |
7877 |
+ |
(T)n |
Simple_repeat |
| scaffold9772 |
7935 |
7969 |
+ |
A-rich |
Low_complexity |
| scaffold9772 |
8406 |
8460 |
+ |
(TAT)n |
Simple_repeat |
| scaffold9772 |
9176 |
9955 |
- |
RS1713 |
Unspecified |
| scaffold9772 |
10200 |
10251 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold9772 |
10536 |
10903 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold9772 |
10926 |
11545 |
- |
PL888 |
Unspecified |
| scaffold9772 |
11127 |
11467 |
- |
RS4278 |
Unspecified |
| scaffold9772 |
12225 |
12701 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold9772 |
12897 |
13737 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold9772 |
13722 |
16106 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold9772 |
13722 |
15968 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold9772 |
15922 |
16121 |
+ |
(A)n |
Simple_repeat |
| scaffold9772 |
16104 |
16121 |
+ |
(A)n |
Simple_repeat |
| scaffold9772 |
16340 |
16363 |
+ |
(A)n |
Simple_repeat |
| scaffold9772 |
16523 |
16604 |
+ |
A-rich |
Low_complexity |
| scaffold9772 |
16643 |
16691 |
+ |
(ACC)n |
Simple_repeat |
| scaffold9772 |
18613 |
18680 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold9772 |
18711 |
18776 |
+ |
(AAGAAAAA)n |
Simple_repeat |
| scaffold9772 |
19456 |
19537 |
+ |
Gypsy-34_SB-I |
LTR/Gypsy |
| scaffold9772 |
20021 |
20340 |
+ |
RS553 |
Unspecified |
| scaffold9772 |
20687 |
20721 |
+ |
G-rich |
Low_complexity |
| scaffold9772 |
20873 |
20991 |
- |
RS9398 |
Unspecified |
| scaffold9772 |
21037 |
21076 |
+ |
(CGG)n |
Simple_repeat |
| scaffold9772 |
21173 |
21344 |
- |
RS1689 |
Unspecified |
| scaffold9772 |
21348 |
21698 |
- |
RS257 |
Unspecified |
| scaffold9772 |
21699 |
22141 |
+ |
RS57 |
Unspecified |
| scaffold9772 |
24003 |
24029 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold9772 |
28503 |
28648 |
+ |
RS215 |
Unspecified |
| scaffold9772 |
28647 |
28815 |
- |
RS559 |
Unspecified |
| scaffold9772 |
28812 |
28905 |
- |
RS649 |
Unspecified |
| scaffold9772 |
28902 |
29132 |
+ |
RS217 |
Unspecified |
| scaffold9772 |
30305 |
30338 |
+ |
(GGACTA)n |
Simple_repeat |
| scaffold9772 |
30657 |
30694 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold9772 |
30880 |
31971 |
+ |
Copia-10_BD-I |
LTR/Copia |
| scaffold9772 |
31986 |
32047 |
+ |
RS260 |
Unspecified |
| scaffold9772 |
31992 |
32044 |
+ |
RS1460 |
Unspecified |
| scaffold9772 |
32475 |
32522 |
+ |
RS18232 |
Unspecified |
| scaffold9772 |
32978 |
33011 |
+ |
(AT)n |
Simple_repeat |
| scaffold9772 |
32978 |
33079 |
+ |
(AT)n |
Simple_repeat |
| scaffold9772 |
33001 |
33079 |
+ |
RS9257 |
Unspecified |
| scaffold9772 |
33418 |
33542 |
+ |
PL517 |
Unspecified |
| scaffold9772 |
33543 |
33576 |
+ |
(TATTAT)n |
Simple_repeat |
| scaffold9772 |
33579 |
33604 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9772 |
37078 |
37533 |
- |
RS35 |
Unspecified |
| scaffold9772 |
38155 |
39830 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold9772 |
38155 |
40176 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold9772 |
39725 |
40176 |
+ |
RS8541 |
Unspecified |
| scaffold9772 |
40154 |
41806 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold9772 |
40176 |
41441 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold9772 |
41583 |
41667 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold9772 |
41812 |
42495 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold9772 |
43436 |
43698 |
- |
RS1 |
Unspecified |
| scaffold9772 |
44849 |
45018 |
- |
RS18 |
Unspecified |
| scaffold9772 |
45398 |
45435 |
+ |
(GCTTCC)n |
Simple_repeat |
| scaffold9772 |
46528 |
48237 |
- |
SHALINE10_MT |
LINE/L1 |
| scaffold9772 |
50467 |
50505 |
+ |
A-rich |
Low_complexity |
| scaffold9772 |
50626 |
50717 |
+ |
RS750 |
Unspecified |
| scaffold9772 |
50728 |
50750 |
+ |
(A)n |
Simple_repeat |
| scaffold9772 |
51316 |
51351 |
+ |
(A)n |
Simple_repeat |
| scaffold9772 |
51355 |
51518 |
+ |
A-rich |
Low_complexity |
| scaffold9772 |
51355 |
51389 |
+ |
A-rich |
Low_complexity |
| scaffold9772 |
51384 |
51518 |
+ |
RS235 |
Unspecified |
| scaffold9772 |
51571 |
51608 |
+ |
(A)n |
Simple_repeat |
| scaffold9772 |
51624 |
51761 |
+ |
RS235 |
Unspecified |
| scaffold9772 |
51997 |
52110 |
+ |
(ATTTTG)n |
Simple_repeat |
| scaffold9772 |
52070 |
52175 |
+ |
(TTGCTA)n |
Simple_repeat |
| scaffold9772 |
52973 |
53013 |
+ |
(TTA)n |
Simple_repeat |
| scaffold9772 |
53128 |
53262 |
- |
RS1833 |
Unspecified |
| scaffold9772 |
53312 |
53331 |
+ |
(A)n |
Simple_repeat |
| scaffold9772 |
53725 |
53974 |
- |
RS279 |
Unspecified |
| scaffold9772 |
54095 |
54116 |
+ |
(A)n |
Simple_repeat |
| scaffold9772 |
54657 |
54704 |
+ |
A-rich |
Low_complexity |
| scaffold9772 |
54845 |
55046 |
+ |
RS1534 |
Unspecified |
| scaffold9772 |
54875 |
55242 |
+ |
RS4921 |
Unspecified |
| scaffold9772 |
55234 |
55278 |
+ |
PL673 |
Unspecified |
| scaffold9772 |
56145 |
56222 |
+ |
(ATCAACA)n |
Simple_repeat |
| scaffold9772 |
56608 |
56697 |
+ |
A-rich |
Low_complexity |
| scaffold9772 |
56785 |
57490 |
+ |
RS4105 |
Unspecified |
| scaffold9772 |
57639 |
57879 |
- |
RS350 |
Unspecified |
| scaffold9772 |
58563 |
58598 |
+ |
(AATACTC)n |
Simple_repeat |
| scaffold9772 |
59454 |
59513 |
+ |
(TGATAAT)n |
Simple_repeat |
| scaffold9772 |
59600 |
59681 |
+ |
(ATTATAC)n |
Simple_repeat |
| scaffold9772 |
59712 |
59740 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold9772 |
60560 |
60599 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9772 |
60712 |
60733 |
+ |
(A)n |
Simple_repeat |
| scaffold9772 |
61047 |
61201 |
+ |
(ATTTTG)n |
Simple_repeat |
| scaffold9772 |
61707 |
61763 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold9772 |
61862 |
61901 |
+ |
(T)n |
Simple_repeat |
| scaffold9772 |
62363 |
62393 |
+ |
(T)n |
Simple_repeat |
| scaffold9772 |
63651 |
63685 |
+ |
(TGTTTG)n |
Simple_repeat |
| scaffold9772 |
64987 |
65378 |
+ |
RS29 |
Unspecified |
| scaffold9772 |
65844 |
65894 |
+ |
RS112 |
Unspecified |
| scaffold9772 |
65920 |
66044 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold9772 |
66045 |
66116 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9772 |
66297 |
66308 |
+ |
(AAC)n |
Simple_repeat |
| scaffold9772 |
66309 |
66384 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9772 |
66385 |
66437 |
+ |
(AAC)n |
Simple_repeat |
| scaffold9772 |
66660 |
66694 |
+ |
GA-rich |
Low_complexity |
| scaffold9772 |
73306 |
73331 |
+ |
(TATTAA)n |
Simple_repeat |
| scaffold9772 |
73332 |
73373 |
+ |
(AAT)n |
Simple_repeat |
| scaffold9772 |
73374 |
73392 |
+ |
(TATTAA)n |
Simple_repeat |
| scaffold9772 |
73416 |
73480 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold9772 |
73513 |
73778 |
+ |
PL840 |
Unspecified |
| scaffold9772 |
74024 |
74097 |
+ |
A-rich |
Low_complexity |
| scaffold9772 |
74302 |
74906 |
- |
RS713 |
Unspecified |