scaffold9912 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold9912 |
2 |
931 |
+ |
PL196 |
Unspecified |
| scaffold9912 |
1187 |
1263 |
+ |
(TAGTAA)n |
Simple_repeat |
| scaffold9912 |
2331 |
2376 |
+ |
(ATGCTTAT)n |
Simple_repeat |
| scaffold9912 |
2665 |
3219 |
- |
PL423 |
Unspecified |
| scaffold9912 |
4047 |
4073 |
+ |
(GAA)n |
Simple_repeat |
| scaffold9912 |
4647 |
4732 |
+ |
RETROSAT2_I-int |
LTR/Gypsy |
| scaffold9912 |
4872 |
6287 |
+ |
Gypsy-6_CP-I |
LTR/Gypsy |
| scaffold9912 |
7646 |
8471 |
- |
RS139 |
Unspecified |
| scaffold9912 |
8466 |
9230 |
- |
PL956 |
Unspecified |
| scaffold9912 |
10292 |
10475 |
- |
RS3023 |
Unspecified |
| scaffold9912 |
11011 |
11037 |
+ |
(T)n |
Simple_repeat |
| scaffold9912 |
11038 |
11056 |
+ |
(G)n |
Simple_repeat |
| scaffold9912 |
11438 |
12483 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold9912 |
11727 |
11760 |
+ |
(TTTTGAT)n |
Simple_repeat |
| scaffold9912 |
11941 |
12107 |
+ |
RS2980 |
Unspecified |
| scaffold9912 |
12277 |
12680 |
- |
RS698 |
Unspecified |
| scaffold9912 |
12801 |
12840 |
+ |
(CTTTATG)n |
Simple_repeat |
| scaffold9912 |
13284 |
13496 |
+ |
Gypsy-30_ST-I |
LTR/Gypsy |
| scaffold9912 |
14062 |
14098 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold9912 |
15465 |
15773 |
+ |
Gypsy-5_PD-I |
LTR/Gypsy |
| scaffold9912 |
16130 |
16208 |
+ |
Gypsy-5_PD-I |
LTR/Gypsy |
| scaffold9912 |
16363 |
16691 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold9912 |
17284 |
17320 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold9912 |
18406 |
18453 |
+ |
(TGCTTAG)n |
Simple_repeat |
| scaffold9912 |
19740 |
19787 |
+ |
(CTT)n |
Simple_repeat |
| scaffold9912 |
21003 |
21136 |
- |
PL202 |
Unspecified |
| scaffold9912 |
21747 |
21869 |
+ |
A-rich |
Low_complexity |
| scaffold9912 |
22770 |
22949 |
+ |
RS5540 |
Unspecified |
| scaffold9912 |
22841 |
23069 |
+ |
RS10163 |
Unspecified |
| scaffold9912 |
23211 |
23229 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9912 |
25202 |
26974 |
- |
hAT |
hAT(TransposonPSI) |
| scaffold9912 |
26959 |
27111 |
- |
hAT |
hAT(TransposonPSI) |
| scaffold9912 |
29292 |
30712 |
- |
RS1496 |
Unspecified |
| scaffold9912 |
29744 |
31427 |
+ |
RS934 |
Unspecified |
| scaffold9912 |
31415 |
31507 |
+ |
PL287 |
Unspecified |
| scaffold9912 |
32955 |
32971 |
+ |
A-rich |
Low_complexity |
| scaffold9912 |
32972 |
32991 |
+ |
(TAA)n |
Simple_repeat |
| scaffold9912 |
32992 |
33002 |
+ |
A-rich |
Low_complexity |
| scaffold9912 |
33061 |
33252 |
- |
RS245 |
Unspecified |
| scaffold9912 |
33704 |
33840 |
+ |
(ATA)n |
Simple_repeat |
| scaffold9912 |
34186 |
34203 |
+ |
(A)n |
Simple_repeat |
| scaffold9912 |
34673 |
34934 |
+ |
RS10 |
Unspecified |
| scaffold9912 |
37459 |
38915 |
+ |
Gypsy-2_Pru-I |
LTR/Gypsy |
| scaffold9912 |
39349 |
39394 |
+ |
A-rich |
Low_complexity |
| scaffold9912 |
39349 |
39543 |
+ |
A-rich |
Low_complexity |
| scaffold9912 |
39377 |
39543 |
- |
RS599 |
Unspecified |
| scaffold9912 |
42352 |
42583 |
- |
RS599 |
Unspecified |
| scaffold9912 |
46299 |
46590 |
- |
PL678 |
Unspecified |
| scaffold9912 |
46594 |
46803 |
+ |
RS10552 |
Unspecified |
| scaffold9912 |
46804 |
47019 |
+ |
RS599 |
Unspecified |
| scaffold9912 |
48260 |
48318 |
+ |
(TTTTCTT)n |
Simple_repeat |
| scaffold9912 |
48635 |
49029 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold9912 |
49299 |
49924 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold9912 |
51648 |
52273 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold9912 |
52811 |
52987 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold9912 |
52910 |
52987 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |