scaffold9914 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold9914 |
31 |
122 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold9914 |
2567 |
2586 |
+ |
(T)n |
Simple_repeat |
| scaffold9914 |
2647 |
2770 |
- |
RS13542 |
Unspecified |
| scaffold9914 |
2854 |
2905 |
+ |
(TTTTCAA)n |
Simple_repeat |
| scaffold9914 |
2965 |
3056 |
+ |
(GGTGGC)n |
Simple_repeat |
| scaffold9914 |
3406 |
3433 |
+ |
(T)n |
Simple_repeat |
| scaffold9914 |
3844 |
4034 |
+ |
(TAT)n |
Simple_repeat |
| scaffold9914 |
4242 |
4321 |
+ |
(ATT)n |
Simple_repeat |
| scaffold9914 |
5315 |
5434 |
+ |
TPN1_IN |
DNA/CMC-EnSpm |
| scaffold9914 |
7629 |
7654 |
+ |
(T)n |
Simple_repeat |
| scaffold9914 |
8794 |
8825 |
+ |
A-rich |
Low_complexity |
| scaffold9914 |
9114 |
9256 |
- |
Caulimovirus-2_GM |
LTR/Caulimovirus |
| scaffold9914 |
9174 |
9212 |
+ |
(T)n |
Simple_repeat |
| scaffold9914 |
12383 |
12433 |
+ |
A-rich |
Low_complexity |
| scaffold9914 |
12675 |
12710 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold9914 |
13055 |
13112 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold9914 |
13112 |
14025 |
- |
ATHILA6C_I-int |
LTR/Gypsy |
| scaffold9914 |
13869 |
14025 |
- |
ATHILA6C_I-int |
LTR/Gypsy |
| scaffold9914 |
13869 |
14276 |
- |
ATHILA6C_I-int |
LTR/Gypsy |
| scaffold9914 |
13969 |
14307 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold9914 |
14268 |
14307 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold9914 |
14518 |
14602 |
- |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold9914 |
14769 |
15071 |
- |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold9914 |
15002 |
15071 |
- |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold9914 |
16160 |
16643 |
- |
PL880 |
Unspecified |
| scaffold9914 |
17048 |
17234 |
- |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold9914 |
18827 |
18862 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold9914 |
19888 |
19925 |
+ |
Copia-95_BRa-I |
LTR/Copia |
| scaffold9914 |
20166 |
20556 |
+ |
PL36 |
Unspecified |
| scaffold9914 |
20671 |
20725 |
+ |
(TATAATT)n |
Simple_repeat |
| scaffold9914 |
22681 |
22726 |
+ |
A-rich |
Low_complexity |
| scaffold9914 |
23678 |
23714 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold9914 |
23976 |
24076 |
+ |
(TTT)n |
Simple_repeat |
| scaffold9914 |
24074 |
24113 |
+ |
A-rich |
Low_complexity |
| scaffold9914 |
24359 |
24417 |
+ |
(T)n |
Simple_repeat |
| scaffold9914 |
24908 |
26149 |
+ |
RS645 |
Unspecified |
| scaffold9914 |
28600 |
28642 |
+ |
A-rich |
Low_complexity |
| scaffold9914 |
29080 |
29116 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold9914 |
29259 |
29288 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold9914 |
29988 |
30063 |
+ |
(ATTC)n |
Simple_repeat |
| scaffold9914 |
32006 |
32055 |
+ |
A-rich |
Low_complexity |
| scaffold9914 |
32325 |
32490 |
+ |
PL125 |
Unspecified |
| scaffold9914 |
32488 |
32580 |
+ |
PL661 |
Unspecified |
| scaffold9914 |
33533 |
33982 |
+ |
RS7261 |
Unspecified |
| scaffold9914 |
34049 |
34103 |
+ |
(GGT)n |
Simple_repeat |
| scaffold9914 |
34878 |
34944 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold9914 |
36107 |
36391 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold9914 |
36258 |
36302 |
+ |
VLINE4_VV |
LINE/L1 |
| scaffold9914 |
36630 |
36725 |
+ |
RS831 |
Unspecified |
| scaffold9914 |
36884 |
37372 |
+ |
RS1152 |
Unspecified |
| scaffold9914 |
37305 |
37771 |
+ |
RS831 |
Unspecified |
| scaffold9914 |
38618 |
38697 |
+ |
GA-rich |
Low_complexity |
| scaffold9914 |
39241 |
39313 |
+ |
A-rich |
Low_complexity |
| scaffold9914 |
39493 |
39943 |
+ |
RS2217 |
Unspecified |
| scaffold9914 |
40111 |
40215 |
+ |
RAM13_I_MT-int |
LTR |
| scaffold9914 |
40367 |
40610 |
- |
RS30 |
Unspecified |
| scaffold9914 |
43396 |
44294 |
- |
PL956 |
Unspecified |
| scaffold9914 |
46205 |
46617 |
+ |
PL947 |
Unspecified |
| scaffold9914 |
46835 |
46944 |
+ |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold9914 |
47173 |
47224 |
+ |
A-rich |
Low_complexity |
| scaffold9914 |
47574 |
47624 |
+ |
(CAAGCAACT)n |
Simple_repeat |
| scaffold9914 |
47638 |
47664 |
+ |
(AGA)n |
Simple_repeat |
| scaffold9914 |
47730 |
47755 |
+ |
(GAA)n |
Simple_repeat |
| scaffold9914 |
47931 |
47986 |
+ |
A-rich |
Low_complexity |
| scaffold9914 |
48166 |
49528 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold9914 |
49618 |
49977 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold9914 |
50304 |
51331 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |