Dca11178.1
Annotation
- 3-exons
- f-1
- sp|B9GY84_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_555216#GO:0003676;GO:0000166#2F0P0C
- Repeat List (scaffold14997)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11178.1 |
7 |
60 |
77 |
53.24 |
54 |
76 |
4e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GY84_POPTR |
25 |
78 |
188 |
28.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11178.1 |
3 |
66 |
77 |
55.84 |
64 |
68 |
7e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0633200-02 |
74 |
137 |
214 |
29.9 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold14997 |
Augustus |
mRNA |
3208 |
3715 |
. |
- |
. |
ID=Dca11178.1;Parent=Dca11178 |
| scaffold14997 |
Augustus |
exon |
3208 |
3262 |
. |
- |
. |
ID=Dca11178.1.exon1;Parent=Dca11178.1 |
| scaffold14997 |
Augustus |
exon |
3361 |
3525 |
. |
- |
. |
ID=Dca11178.1.exon2;Parent=Dca11178.1 |
| scaffold14997 |
Augustus |
exon |
3702 |
3715 |
. |
- |
. |
ID=Dca11178.1.exon3;Parent=Dca11178.1 |
