Dca11997.1
Annotation
- 4-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold15410)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11997.1 |
9 |
55 |
61 |
52.45 |
47 |
69 |
1e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q949K9_CICAR |
361 |
407 |
655 |
7.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11997.1 |
19 |
54 |
61 |
31.14 |
36 |
53 |
2e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1107 |
1142 |
1539 |
2.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15410 |
Augustus |
mRNA |
7198 |
12212 |
. |
+ |
. |
ID=Dca11997.1;Parent=Dca11997 |
| scaffold15410 |
Augustus |
exon |
7198 |
7863 |
. |
+ |
. |
ID=Dca11997.1.exon1;Parent=Dca11997.1 |
| scaffold15410 |
Augustus |
exon |
8473 |
8908 |
. |
+ |
. |
ID=Dca11997.1.exon2;Parent=Dca11997.1 |
| scaffold15410 |
Augustus |
exon |
11026 |
11137 |
. |
+ |
. |
ID=Dca11997.1.exon3;Parent=Dca11997.1 |
| scaffold15410 |
Augustus |
exon |
11277 |
12212 |
. |
+ |
. |
ID=Dca11997.1.exon4;Parent=Dca11997.1 |
