Carnation DB

Dca13219.1

Annotation

13-exons
f-1
sp|F6H7I5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0116g01480#GO:0045252;GO:0004149;GO:0006099#1F1P1C
Os04t0394200-03 Similar to 2-oxoglutarate dehydrogenase E2 subunit.
Repeat List (scaffold1611)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13219.1	1	450	450	73.77	450	73	0
Target_name	Start	End	Length	Cov(%)
sp\|F6H7I5_VITVI	18	473	473	96.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13219.1	69	450	450	67.11	382	78	2e-170
Target_name	Start	End	Length	Cov(%)
Os04t0394200-03	60	440	441	86.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1611	Augus-PASA	mRNA	10547	16159	.	-	.	ID=Dca13219.1;Parent=Dca13219
scaffold1611	Augus-PASA	exon	10547	10738	.	-	.	ID=Dca13219.1.exon1;Parent=Dca13219.1
scaffold1611	Augus-PASA	exon	11234	11428	.	-	.	ID=Dca13219.1.exon2;Parent=Dca13219.1
scaffold1611	Augus-PASA	exon	11545	11655	.	-	.	ID=Dca13219.1.exon3;Parent=Dca13219.1
scaffold1611	Augus-PASA	exon	11759	11849	.	-	.	ID=Dca13219.1.exon4;Parent=Dca13219.1
scaffold1611	Augus-PASA	exon	13094	13188	.	-	.	ID=Dca13219.1.exon5;Parent=Dca13219.1
scaffold1611	Augus-PASA	exon	13305	13562	.	-	.	ID=Dca13219.1.exon6;Parent=Dca13219.1
scaffold1611	Augus-PASA	exon	13679	13723	.	-	.	ID=Dca13219.1.exon7;Parent=Dca13219.1
scaffold1611	Augus-PASA	exon	13814	13869	.	-	.	ID=Dca13219.1.exon8;Parent=Dca13219.1
scaffold1611	Augus-PASA	exon	13988	14062	.	-	.	ID=Dca13219.1.exon9;Parent=Dca13219.1
scaffold1611	Augus-PASA	exon	14161	14228	.	-	.	ID=Dca13219.1.exon10;Parent=Dca13219.1
scaffold1611	Augus-PASA	exon	14399	14426	.	-	.	ID=Dca13219.1.exon11;Parent=Dca13219.1
scaffold1611	Augus-PASA	exon	14515	14575	.	-	.	ID=Dca13219.1.exon12;Parent=Dca13219.1
scaffold1611	Augus-PASA	exon	16082	16159	.	-	.	ID=Dca13219.1.exon13;Parent=Dca13219.1