Carnation DB

Dca1376.1

Annotation

6-exons
f-1
sp|F6HQJ9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0063g02110#GO:0016881;GO:0005524#2F0P0C
sp|B9SGH9_RICCO#Ubiquitin-conjugating enzyme m, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0553170#GO:0005524;GO:0004842#2F0P0C
Repeat List (scaffold104)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1376.1	1	179	204	77.45	179	89	9e-91
Target_name	Start	End	Length	Cov(%)
sp\|F6HQJ9_VITVI	33	211	215	83.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1376.1	1	179	204	72.05	179	82	7e-85
Target_name	Start	End	Length	Cov(%)
AT4G36800.1	1	180	184	97.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold104	Augustus	mRNA	103614	106272	.	+	.	ID=Dca1376.1;Parent=Dca1376
scaffold104	Augustus	exon	103614	103722	.	+	.	ID=Dca1376.1.exon1;Parent=Dca1376.1
scaffold104	Augus-PASA	exon	104339	104447	.	+	.	ID=Dca1376.1.exon2;Parent=Dca1376.1
scaffold104	Augus-PASA	exon	104845	104923	.	+	.	ID=Dca1376.1.exon3;Parent=Dca1376.1
scaffold104	Augus-PASA	exon	105042	105158	.	+	.	ID=Dca1376.1.exon4;Parent=Dca1376.1
scaffold104	Augustus	exon	105246	105354	.	+	.	ID=Dca1376.1.exon5;Parent=Dca1376.1
scaffold104	Augustus	exon	106181	106272	.	+	.	ID=Dca1376.1.exon6;Parent=Dca1376.1