Carnation DB

Dca1383.1

Annotation

8-exons
f-1
sp|B9HTM3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_724772#GO:0004591;GO:0030976;GO:0006099#2F1P0C
Repeat List (scaffold104)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1383.1	1	1017	1017	87.21	1017	87	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HTM3_POPTR	1	1020	1021	99.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1383.1	1	1014	1017	84.36	1014	85	0
Target_name	Start	End	Length	Cov(%)
AT3G55410.1	1	1016	1017	99.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold104	Augustus	mRNA	172562	177242	.	+	.	ID=Dca1383.1;Parent=Dca1383
scaffold104	Augustus	exon	172562	174103	.	+	.	ID=Dca1383.1.exon1;Parent=Dca1383.1
scaffold104	Augustus	exon	174355	174581	.	+	.	ID=Dca1383.1.exon2;Parent=Dca1383.1
scaffold104	Augustus	exon	174670	175002	.	+	.	ID=Dca1383.1.exon3;Parent=Dca1383.1
scaffold104	Augustus	exon	175492	175738	.	+	.	ID=Dca1383.1.exon4;Parent=Dca1383.1
scaffold104	Augustus	exon	175848	175976	.	+	.	ID=Dca1383.1.exon5;Parent=Dca1383.1
scaffold104	Augustus	exon	176067	176282	.	+	.	ID=Dca1383.1.exon6;Parent=Dca1383.1
scaffold104	Augustus	exon	176465	176588	.	+	.	ID=Dca1383.1.exon7;Parent=Dca1383.1
scaffold104	Augustus	exon	177007	177242	.	+	.	ID=Dca1383.1.exon8;Parent=Dca1383.1