Carnation DB

Dca1393.1

Annotation

6-exons
f-1
sp|D7T1L9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0009g01000#GO:0008270#1F0P0C
AT5G22000.2 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-7279553 FORWARD LENGTH=375
Repeat List (scaffold104)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1393.1	1	302	325	54.15	302	52	4e-78
Target_name	Start	End	Length	Cov(%)
sp\|D7T1L9_VITVI	6	343	393	86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1393.1	7	318	325	51.07	312	50	2e-74
Target_name	Start	End	Length	Cov(%)
AT5G22000.2	8	340	375	88.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold104	Augus-PASA	mRNA	242091	243708	.	-	.	ID=Dca1393.1;Parent=Dca1393
scaffold104	Augus-PASA	exon	242091	242292	.	-	.	ID=Dca1393.1.exon1;Parent=Dca1393.1
scaffold104	Augus-PASA	exon	242432	242536	.	-	.	ID=Dca1393.1.exon2;Parent=Dca1393.1
scaffold104	Augus-PASA	exon	242654	243076	.	-	.	ID=Dca1393.1.exon3;Parent=Dca1393.1
scaffold104	Augus-PASA	exon	243161	243223	.	-	.	ID=Dca1393.1.exon4;Parent=Dca1393.1
scaffold104	Augus-PASA	exon	243390	243436	.	-	.	ID=Dca1393.1.exon5;Parent=Dca1393.1
scaffold104	Augustus	exon	243571	243708	.	-	.	ID=Dca1393.1.exon6;Parent=Dca1393.1