Carnation DB

Dca15964.1

Annotation

6-exons
f-7
sp|F6HC22_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g03600#GO:0003676;GO:0000166;GO:0008270#3F0P0C
Repeat List (scaffold1784)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15964.1	37	324	335	59.7	288	66	4e-77
Target_name	Start	End	Length	Cov(%)
sp\|F6HC22_VITVI	38	336	336	88.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15964.1	37	335	335	49.25	299	54	2e-65
Target_name	Start	End	Length	Cov(%)
AT3G53500.2	6	282	284	97.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1784	Augustus	mRNA	1468	4002	.	+	.	ID=Dca15964.1;Parent=Dca15964
scaffold1784	Augustus	exon	1468	1670	.	+	.	ID=Dca15964.1.exon1;Parent=Dca15964.1
scaffold1784	Augus-PASA	exon	2449	2488	.	+	.	ID=Dca15964.1.exon2;Parent=Dca15964.1
scaffold1784	Augus-PASA	exon	2624	2719	.	+	.	ID=Dca15964.1.exon3;Parent=Dca15964.1
scaffold1784	Augus-PASA	exon	2970	3172	.	+	.	ID=Dca15964.1.exon4;Parent=Dca15964.1
scaffold1784	Augus-PASA	exon	3427	3528	.	+	.	ID=Dca15964.1.exon5;Parent=Dca15964.1
scaffold1784	Augus-PASA	exon	3639	4002	.	+	.	ID=Dca15964.1.exon6;Parent=Dca15964.1