Dca17223.1
Annotation
- 4-exons
- f-1
- sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os03t0643433-00 Similar to J013022N21, full insert sequence.
- Repeat List (scaffold1870)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17223.1 |
1 |
79 |
228 |
17.1 |
79 |
50 |
2e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG3_BETVU |
690 |
768 |
1114 |
7.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17223.1 |
2 |
79 |
228 |
11.84 |
78 |
35 |
6e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0643433-00 |
211 |
288 |
644 |
12.11 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1870 |
Augustus |
mRNA |
46061 |
50777 |
. |
+ |
. |
ID=Dca17223.1;Parent=Dca17223 |
| scaffold1870 |
Augustus |
exon |
46061 |
46296 |
. |
+ |
. |
ID=Dca17223.1.exon1;Parent=Dca17223.1 |
| scaffold1870 |
Augustus |
exon |
46864 |
46988 |
. |
+ |
. |
ID=Dca17223.1.exon2;Parent=Dca17223.1 |
| scaffold1870 |
Augustus |
exon |
48748 |
48850 |
. |
+ |
. |
ID=Dca17223.1.exon3;Parent=Dca17223.1 |
| scaffold1870 |
Augustus |
exon |
50555 |
50777 |
. |
+ |
. |
ID=Dca17223.1.exon4;Parent=Dca17223.1 |
