Carnation DB

Dca19766.1

Annotation

4-exons
f-1
sp|A5BFF8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0034g01010#unknown#0F0P0C
AT1G11400.1 | Symbols: PYM | partner of Y14-MAGO | chr1:3838777-3839978 FORWARD LENGTH=204
Repeat List (scaffold2037)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19766.1	4	122	131	60.3	119	62	9e-38
Target_name	Start	End	Length	Cov(%)
sp\|A5BFF8_VITVI	18	145	234	54.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19766.1	1	118	131	54.96	118	62	1e-30
Target_name	Start	End	Length	Cov(%)
AT1G11400.1	12	125	204	55.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2037	Augustus	mRNA	16338	19749	.	-	.	ID=Dca19766.1;Parent=Dca19766
scaffold2037	Augustus	exon	16338	16367	.	-	.	ID=Dca19766.1.exon1;Parent=Dca19766.1
scaffold2037	Augustus	exon	16429	16524	.	-	.	ID=Dca19766.1.exon2;Parent=Dca19766.1
scaffold2037	Augustus	exon	17843	17959	.	-	.	ID=Dca19766.1.exon3;Parent=Dca19766.1
scaffold2037	Augustus	exon	19597	19749	.	-	.	ID=Dca19766.1.exon4;Parent=Dca19766.1
scaffold2037	Augustus	mRNA	16147	22886	.	-	.	ID=Dca19766.2;Parent=Dca19766
scaffold2037	Augustus	exon	16147	16524	.	-	.	ID=Dca19766.2.exon1;Parent=Dca19766.2
scaffold2037	Augustus	exon	17843	17959	.	-	.	ID=Dca19766.2.exon2;Parent=Dca19766.2
scaffold2037	Augustus	exon	22734	22886	.	-	.	ID=Dca19766.2.exon3;Parent=Dca19766.2
scaffold2037	Augustus	mRNA	16147	19749	.	-	.	ID=Dca19766.3;Parent=Dca19766
scaffold2037	Augustus	exon	16147	16524	.	-	.	ID=Dca19766.3.exon1;Parent=Dca19766.3
scaffold2037	Augustus	exon	17843	17959	.	-	.	ID=Dca19766.3.exon2;Parent=Dca19766.3
scaffold2037	Augustus	exon	19597	19749	.	-	.	ID=Dca19766.3.exon3;Parent=Dca19766.3