Carnation DB

Dca21581.1

Annotation

7-exons
f-1
sp|B9SFN0_RICCO#Rrp4, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0647870#unknown#0F0P0C
Repeat List (scaffold218)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21581.1	4	317	321	61.37	314	62	4e-112
Target_name	Start	End	Length	Cov(%)
sp\|B9SFN0_RICCO	3	315	322	97.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21581.1	4	319	321	60.12	316	62	8e-112
Target_name	Start	End	Length	Cov(%)
AT1G03360.1	5	319	322	97.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold218	Augus-PASA	mRNA	5400	10131	.	+	.	ID=Dca21581.1;Parent=Dca21581
scaffold218	Augus-PASA	exon	5400	5560	.	+	.	ID=Dca21581.1.exon1;Parent=Dca21581.1
scaffold218	Augus-PASA	exon	5662	5763	.	+	.	ID=Dca21581.1.exon2;Parent=Dca21581.1
scaffold218	Augus-PASA	exon	5865	5910	.	+	.	ID=Dca21581.1.exon3;Parent=Dca21581.1
scaffold218	Augus-PASA	exon	6805	6894	.	+	.	ID=Dca21581.1.exon4;Parent=Dca21581.1
scaffold218	Augus-PASA	exon	9245	9310	.	+	.	ID=Dca21581.1.exon5;Parent=Dca21581.1
scaffold218	Augus-PASA	exon	9395	9463	.	+	.	ID=Dca21581.1.exon6;Parent=Dca21581.1
scaffold218	Augus-PASA	exon	9700	10131	.	+	.	ID=Dca21581.1.exon7;Parent=Dca21581.1