Carnation DB

Dca21594.1

Annotation

7-exons
f-1
sp|D7TBA6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g02520#unknown#0F0P0C
AT4G29520.1 | Symbols: | LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). | chr4:14494056-14495657 REVERSE LENGTH=306
Repeat List (scaffold218)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21594.1	4	319	319	59.24	316	60	3e-98
Target_name	Start	End	Length	Cov(%)
sp\|D7TBA6_VITVI	2	301	301	99.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21594.1	28	300	319	50.78	273	60	5e-84
Target_name	Start	End	Length	Cov(%)
AT4G29520.1	26	290	306	86.6

seqname	source	feature	start	end	score	strand	frame	group
scaffold218	Augus-PASA	mRNA	138590	140742	.	-	.	ID=Dca21594.1;Parent=Dca21594
scaffold218	Augus-PASA	exon	138590	138808	.	-	.	ID=Dca21594.1.exon1;Parent=Dca21594.1
scaffold218	Augus-PASA	exon	138901	139035	.	-	.	ID=Dca21594.1.exon2;Parent=Dca21594.1
scaffold218	Augus-PASA	exon	139117	139194	.	-	.	ID=Dca21594.1.exon3;Parent=Dca21594.1
scaffold218	Augus-PASA	exon	139475	139606	.	-	.	ID=Dca21594.1.exon4;Parent=Dca21594.1
scaffold218	Augus-PASA	exon	139743	139811	.	-	.	ID=Dca21594.1.exon5;Parent=Dca21594.1
scaffold218	Augus-PASA	exon	140312	140422	.	-	.	ID=Dca21594.1.exon6;Parent=Dca21594.1
scaffold218	Augus-PASA	exon	140527	140742	.	-	.	ID=Dca21594.1.exon7;Parent=Dca21594.1