Dca21600.1
Annotation
- 4-exons
- f-1
- sp|A9P9K3_POPTR#40S ribosomal protein S12#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003735;GO:0006412#1F1P0C
- Repeat List (scaffold218)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21600.1 |
1 |
141 |
141 |
82.26 |
141 |
81 |
2e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9P9K3_POPTR |
1 |
144 |
144 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21600.1 |
12 |
141 |
141 |
78.01 |
130 |
83 |
1e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0229900-01 |
6 |
138 |
139 |
95.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold218 |
Augustus |
mRNA |
197424 |
198434 |
. |
+ |
. |
ID=Dca21600.1;Parent=Dca21600 |
| scaffold218 |
Augustus |
exon |
197424 |
197431 |
. |
+ |
. |
ID=Dca21600.1.exon1;Parent=Dca21600.1 |
| scaffold218 |
Augustus |
exon |
197600 |
197891 |
. |
+ |
. |
ID=Dca21600.1.exon2;Parent=Dca21600.1 |
| scaffold218 |
Augustus |
exon |
198099 |
198164 |
. |
+ |
. |
ID=Dca21600.1.exon3;Parent=Dca21600.1 |
| scaffold218 |
Augustus |
exon |
198375 |
198434 |
. |
+ |
. |
ID=Dca21600.1.exon4;Parent=Dca21600.1 |
