Dca24156.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold2401)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca24156.1 |
1 |
166 |
168 |
66.66 |
166 |
51 |
1e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
705 |
926 |
964 |
23.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca24156.1 |
53 |
166 |
168 |
23.21 |
114 |
35 |
1e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1249 |
1359 |
1401 |
7.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2401 |
Augustus |
mRNA |
31910 |
32540 |
. |
+ |
. |
ID=Dca24156.1;Parent=Dca24156 |
| scaffold2401 |
Augustus |
exon |
31910 |
32043 |
. |
+ |
. |
ID=Dca24156.1.exon1;Parent=Dca24156.1 |
| scaffold2401 |
Augustus |
exon |
32168 |
32540 |
. |
+ |
. |
ID=Dca24156.1.exon2;Parent=Dca24156.1 |
