Dca2438.1
Annotation
- 4-exons
- f-1
- sp|Q6L4J8_SOLDE#Putative polyprotein#Solanum demissum (Wild potato)#Name=PGEC219.6#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1083)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2438.1 |
11 |
293 |
791 |
11.12 |
283 |
31 |
8e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L4J8_SOLDE |
3 |
244 |
1065 |
22.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2438.1 |
445 |
770 |
791 |
13.52 |
326 |
31 |
6e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
634 |
970 |
1401 |
24.05 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1083 |
Augustus |
mRNA |
62086 |
65215 |
. |
+ |
. |
ID=Dca2438.1;Parent=Dca2438 |
| scaffold1083 |
Augustus |
exon |
62086 |
62992 |
. |
+ |
. |
ID=Dca2438.1.exon1;Parent=Dca2438.1 |
| scaffold1083 |
Augustus |
exon |
63274 |
63683 |
. |
+ |
. |
ID=Dca2438.1.exon2;Parent=Dca2438.1 |
| scaffold1083 |
Augustus |
exon |
64020 |
64811 |
. |
+ |
. |
ID=Dca2438.1.exon3;Parent=Dca2438.1 |
| scaffold1083 |
Augustus |
exon |
64949 |
65215 |
. |
+ |
. |
ID=Dca2438.1.exon4;Parent=Dca2438.1 |
