Carnation DB

Dca26199.1

Annotation

5-exons
f-1
sp|B9S2R9_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0561320#GO:0005488#1F0P0C
Os02t0553500-00 Tetratricopeptide-like helical domain containing protein.
Repeat List (scaffold260)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26199.1	1	212	214	55.14	212	56	1e-60
Target_name	Start	End	Length	Cov(%)
sp\|B9S2R9_RICCO	15	213	216	92.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26199.1	1	211	214	51.86	211	53	3e-53
Target_name	Start	End	Length	Cov(%)
Os02t0553500-00	26	219	254	76.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold260	Augustus	mRNA	77718	80333	.	-	.	ID=Dca26199.1;Parent=Dca26199
scaffold260	Augustus	exon	77718	77849	.	-	.	ID=Dca26199.1.exon1;Parent=Dca26199.1
scaffold260	Augustus	exon	78132	78218	.	-	.	ID=Dca26199.1.exon2;Parent=Dca26199.1
scaffold260	Augustus	exon	78578	78609	.	-	.	ID=Dca26199.1.exon3;Parent=Dca26199.1
scaffold260	Augustus	exon	79064	79202	.	-	.	ID=Dca26199.1.exon4;Parent=Dca26199.1
scaffold260	Augustus	exon	80079	80333	.	-	.	ID=Dca26199.1.exon5;Parent=Dca26199.1