Carnation DB

Dca26557.1

Annotation

9-exons
f-1
sp|F6H2J6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g00140#GO:0005634;GO:0003700;GO:0004871#2F0P1C
AT1G78540.2 | Symbols: SHB | SH2 domain protein B | chr1:29541195-29544574 REVERSE LENGTH=696
Repeat List (scaffold2638)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26557.1	8	555	558	51.07	548	52	1e-159
Target_name	Start	End	Length	Cov(%)
sp\|F6H2J6_VITVI	92	641	669	82.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26557.1	4	554	558	41.93	551	43	1e-127
Target_name	Start	End	Length	Cov(%)
AT1G78540.2	161	663	696	72.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2638	Augus-PASA	mRNA	19576	22373	.	-	.	ID=Dca26557.1;Parent=Dca26557
scaffold2638	Augus-PASA	exon	19576	19591	.	-	.	ID=Dca26557.1.exon1;Parent=Dca26557.1
scaffold2638	Augus-PASA	exon	19682	19759	.	-	.	ID=Dca26557.1.exon2;Parent=Dca26557.1
scaffold2638	Augus-PASA	exon	19850	20193	.	-	.	ID=Dca26557.1.exon3;Parent=Dca26557.1
scaffold2638	Augustus	exon	20275	20437	.	-	.	ID=Dca26557.1.exon4;Parent=Dca26557.1
scaffold2638	Augustus	exon	20539	21191	.	-	.	ID=Dca26557.1.exon5;Parent=Dca26557.1
scaffold2638	Augustus	exon	21268	21432	.	-	.	ID=Dca26557.1.exon6;Parent=Dca26557.1
scaffold2638	Augustus	exon	21673	21750	.	-	.	ID=Dca26557.1.exon7;Parent=Dca26557.1
scaffold2638	Augustus	exon	22116	22205	.	-	.	ID=Dca26557.1.exon8;Parent=Dca26557.1
scaffold2638	Augustus	exon	22284	22373	.	-	.	ID=Dca26557.1.exon9;Parent=Dca26557.1