Dca26722.1
Annotation
- 3-exons
- f-1
- sp|B9II39_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_255709#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
- AT3G57790.1 | Symbols: | Pectin lyase-like superfamily protein | chr3:21405387-21407088 REVERSE LENGTH=490
- Repeat List (scaffold2655)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26722.1 |
39 |
474 |
480 |
64.79 |
436 |
71 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9II39_POPTR |
6 |
442 |
445 |
98.2 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26722.1 |
45 |
474 |
480 |
62.7 |
430 |
69 |
2e-174
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G57790.1 |
34 |
471 |
490 |
89.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2655 |
Augus-PASA |
mRNA |
21209 |
24175 |
. |
- |
. |
ID=Dca26722.1;Parent=Dca26722 |
| scaffold2655 |
Augus-PASA |
exon |
21209 |
21708 |
. |
- |
. |
ID=Dca26722.1.exon1;Parent=Dca26722.1 |
| scaffold2655 |
Augus-PASA |
exon |
21948 |
22279 |
. |
- |
. |
ID=Dca26722.1.exon2;Parent=Dca26722.1 |
| scaffold2655 |
Augus-PASA |
exon |
23565 |
24175 |
. |
- |
. |
ID=Dca26722.1.exon3;Parent=Dca26722.1 |
