Carnation DB

Dca26853.1

Annotation

8-exons
f-1
sp|B9IIM1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1103534#unknown#0F0P0C
AT3G09180.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627); Has 112 Blast hits to 112 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr3:2819278-2821096 FORWARD LENGTH=402
Repeat List (scaffold267)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26853.1	11	357	358	55.3	347	54	3e-99
Target_name	Start	End	Length	Cov(%)
sp\|B9IIM1_POPTR	1	348	417	83.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26853.1	36	357	358	50.83	322	55	1e-93
Target_name	Start	End	Length	Cov(%)
AT3G09180.1	24	346	402	80.34

seqname	source	feature	start	end	score	strand	frame	group
scaffold267	Augustus	mRNA	44927	48606	.	-	.	ID=Dca26853.1;Parent=Dca26853
scaffold267	Augustus	exon	44927	45007	.	-	.	ID=Dca26853.1.exon1;Parent=Dca26853.1
scaffold267	Augustus	exon	45128	45327	.	-	.	ID=Dca26853.1.exon2;Parent=Dca26853.1
scaffold267	Augustus	exon	45408	45451	.	-	.	ID=Dca26853.1.exon3;Parent=Dca26853.1
scaffold267	Augustus	exon	45552	45620	.	-	.	ID=Dca26853.1.exon4;Parent=Dca26853.1
scaffold267	Augustus	exon	45736	45818	.	-	.	ID=Dca26853.1.exon5;Parent=Dca26853.1
scaffold267	Augustus	exon	46341	46779	.	-	.	ID=Dca26853.1.exon6;Parent=Dca26853.1
scaffold267	Augustus	exon	47460	47625	.	-	.	ID=Dca26853.1.exon7;Parent=Dca26853.1
scaffold267	Augustus	exon	48288	48606	.	-	.	ID=Dca26853.1.exon8;Parent=Dca26853.1