Carnation DB

Dca26946.1

Annotation

12-exons
f-1
sp|D7U2U2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g02620#GO:0005737;GO:0005524;GO:0004827;GO:0006433#2F1P1C
AT3G62120.1 | Symbols: | Class II aaRS and biotin synthetases superfamily protein | chr3:23001227-23003849 REVERSE LENGTH=530
Repeat List (scaffold268)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26946.1	28	513	513	81.09	486	86	0
Target_name	Start	End	Length	Cov(%)
sp\|D7U2U2_VITVI	32	516	516	93.99

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26946.1	14	513	513	80.89	500	83	0
Target_name	Start	End	Length	Cov(%)
AT3G62120.1	32	530	530	94.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold268	Augus-PASA	mRNA	154090	158806	.	-	.	ID=Dca26946.1;Parent=Dca26946
scaffold268	Augus-PASA	exon	154090	154154	.	-	.	ID=Dca26946.1.exon1;Parent=Dca26946.1
scaffold268	Augus-PASA	exon	154387	154480	.	-	.	ID=Dca26946.1.exon2;Parent=Dca26946.1
scaffold268	Augus-PASA	exon	154610	154828	.	-	.	ID=Dca26946.1.exon3;Parent=Dca26946.1
scaffold268	Augus-PASA	exon	155070	155354	.	-	.	ID=Dca26946.1.exon4;Parent=Dca26946.1
scaffold268	Augus-PASA	exon	155696	155848	.	-	.	ID=Dca26946.1.exon5;Parent=Dca26946.1
scaffold268	Augus-PASA	exon	155972	156094	.	-	.	ID=Dca26946.1.exon6;Parent=Dca26946.1
scaffold268	Augus-PASA	exon	156343	156409	.	-	.	ID=Dca26946.1.exon7;Parent=Dca26946.1
scaffold268	Augustus	exon	156744	156931	.	-	.	ID=Dca26946.1.exon8;Parent=Dca26946.1
scaffold268	Augustus	exon	157416	157532	.	-	.	ID=Dca26946.1.exon9;Parent=Dca26946.1
scaffold268	Augustus	exon	158219	158311	.	-	.	ID=Dca26946.1.exon10;Parent=Dca26946.1
scaffold268	Augustus	exon	158552	158637	.	-	.	ID=Dca26946.1.exon11;Parent=Dca26946.1
scaffold268	Augustus	exon	158755	158806	.	-	.	ID=Dca26946.1.exon12;Parent=Dca26946.1