Dca27117.1
Annotation
- 3-exons
- f-1
- sp|O48622_SPIOL#85 kDa cold acclimation protein#Spinacia oleracea (Spinach)#unknown#GO:0006950;GO:0009415#0F2P0C
- Repeat List (scaffold27)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27117.1 |
1 |
590 |
590 |
34.91 |
590 |
33 |
2e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O48622_SPIOL |
1 |
535 |
535 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27117.1 |
350 |
462 |
590 |
7.96 |
113 |
40 |
9e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G20440.1 |
135 |
249 |
265 |
43.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold27 |
Augustus |
mRNA |
145378 |
147525 |
. |
+ |
. |
ID=Dca27117.1;Parent=Dca27117 |
| scaffold27 |
Augustus |
exon |
145378 |
145629 |
. |
+ |
. |
ID=Dca27117.1.exon1;Parent=Dca27117.1 |
| scaffold27 |
Augustus |
exon |
145918 |
147180 |
. |
+ |
. |
ID=Dca27117.1.exon2;Parent=Dca27117.1 |
| scaffold27 |
Augustus |
exon |
147268 |
147525 |
. |
+ |
. |
ID=Dca27117.1.exon3;Parent=Dca27117.1 |
