Dca29700.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2QTD3_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g20040#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold29674)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29700.1 |
1 |
300 |
390 |
61.79 |
300 |
81 |
5e-142
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
1042 |
1337 |
1717 |
17.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29700.1 |
3 |
284 |
390 |
23.58 |
282 |
33 |
2e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
171 |
446 |
591 |
46.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold29674 |
Augustus |
mRNA |
937 |
5707 |
. |
- |
. |
ID=Dca29700.1;Parent=Dca29700 |
| scaffold29674 |
Augustus |
exon |
937 |
1181 |
. |
- |
. |
ID=Dca29700.1.exon1;Parent=Dca29700.1 |
| scaffold29674 |
Augustus |
exon |
4780 |
5707 |
. |
- |
. |
ID=Dca29700.1.exon2;Parent=Dca29700.1 |
