Dca31429.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3164)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31429.1 |
3 |
555 |
663 |
42.68 |
553 |
51 |
1e-130
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
171 |
700 |
1717 |
30.86 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31429.1 |
357 |
449 |
663 |
5.27 |
93 |
38 |
6e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3164 |
Augustus |
mRNA |
18842 |
22732 |
. |
- |
. |
ID=Dca31429.1;Parent=Dca31429 |
| scaffold3164 |
Augustus |
exon |
18842 |
18911 |
. |
- |
. |
ID=Dca31429.1.exon1;Parent=Dca31429.1 |
| scaffold3164 |
Augustus |
exon |
20662 |
20914 |
. |
- |
. |
ID=Dca31429.1.exon2;Parent=Dca31429.1 |
| scaffold3164 |
Augustus |
exon |
21064 |
22732 |
. |
- |
. |
ID=Dca31429.1.exon3;Parent=Dca31429.1 |
