Carnation DB

Dca31813.1

Annotation

15-exons
f-1
sp|D7MGD5_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_912388#GO:0005737;GO:0005524;GO:0004826;GO:0000049;GO:0006432#3F1P1C
AT4G39280.1 | Symbols: | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative | chr4:18281641-18284831 REVERSE LENGTH=485
Repeat List (scaffold321)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31813.1	1	423	423	77.77	423	68	0
Target_name	Start	End	Length	Cov(%)
sp\|D7MGD5_ARALL	1	485	485	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31813.1	1	423	423	76.83	423	67	0
Target_name	Start	End	Length	Cov(%)
AT4G39280.1	1	485	485	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold321	Augus-PASA	mRNA	86637	94545	.	-	.	ID=Dca31813.1;Parent=Dca31813
scaffold321	Augus-PASA	exon	86637	86687	.	-	.	ID=Dca31813.1.exon1;Parent=Dca31813.1
scaffold321	Augus-PASA	exon	86773	86827	.	-	.	ID=Dca31813.1.exon2;Parent=Dca31813.1
scaffold321	Augus-PASA	exon	86909	87034	.	-	.	ID=Dca31813.1.exon3;Parent=Dca31813.1
scaffold321	Augus-PASA	exon	87175	87241	.	-	.	ID=Dca31813.1.exon4;Parent=Dca31813.1
scaffold321	Augus-PASA	exon	87608	87707	.	-	.	ID=Dca31813.1.exon5;Parent=Dca31813.1
scaffold321	Augus-PASA	exon	87879	87975	.	-	.	ID=Dca31813.1.exon6;Parent=Dca31813.1
scaffold321	Augus-PASA	exon	88073	88157	.	-	.	ID=Dca31813.1.exon7;Parent=Dca31813.1
scaffold321	Augus-PASA	exon	88358	88434	.	-	.	ID=Dca31813.1.exon8;Parent=Dca31813.1
scaffold321	Augus-PASA	exon	89362	89400	.	-	.	ID=Dca31813.1.exon9;Parent=Dca31813.1
scaffold321	Augus-PASA	exon	89521	89558	.	-	.	ID=Dca31813.1.exon10;Parent=Dca31813.1
scaffold321	Augus-PASA	exon	90573	90663	.	-	.	ID=Dca31813.1.exon11;Parent=Dca31813.1
scaffold321	Augustus	exon	91151	91269	.	-	.	ID=Dca31813.1.exon12;Parent=Dca31813.1
scaffold321	Augus-PASA	exon	92195	92251	.	-	.	ID=Dca31813.1.exon13;Parent=Dca31813.1
scaffold321	Augus-PASA	exon	92999	93121	.	-	.	ID=Dca31813.1.exon14;Parent=Dca31813.1
scaffold321	Augus-PASA	exon	94399	94545	.	-	.	ID=Dca31813.1.exon15;Parent=Dca31813.1