Carnation DB

Dca32020.1

Annotation

5-exons
f-1
sp|B9MTX3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_739883#GO:0005524;GO:0004672#2F0P0C
AT1G14390.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr1:4924277-4926794 FORWARD LENGTH=747
Repeat List (scaffold3238)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32020.1	19	740	750	49.46	722	51	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MTX3_POPTR	14	738	745	97.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32020.1	28	746	750	45.46	719	46	1e-170
Target_name	Start	End	Length	Cov(%)
AT1G14390.1	24	747	747	96.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3238	Augustus	mRNA	22308	25267	.	+	.	ID=Dca32020.1;Parent=Dca32020
scaffold3238	Augustus	exon	22308	23592	.	+	.	ID=Dca32020.1.exon1;Parent=Dca32020.1
scaffold3238	Augustus	exon	23985	24118	.	+	.	ID=Dca32020.1.exon2;Parent=Dca32020.1
scaffold3238	Augustus	exon	24200	24634	.	+	.	ID=Dca32020.1.exon3;Parent=Dca32020.1
scaffold3238	Augus-PASA	exon	24733	24876	.	+	.	ID=Dca32020.1.exon4;Parent=Dca32020.1
scaffold3238	Augus-PASA	exon	25013	25267	.	+	.	ID=Dca32020.1.exon5;Parent=Dca32020.1