Dca32093.1
Annotation
- 4-exons
- f-1
- sp|Q9FZ09_TOBAC#Patatin-like protein 1#Nicotiana tabacum (Common tobacco)#Name=PAT1#GO:0016787;GO:0006629#1F1P0C
- Repeat List (scaffold3247)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32093.1 |
1 |
154 |
214 |
39.71 |
154 |
55 |
4e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FZ09_TOBAC |
230 |
386 |
420 |
37.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32093.1 |
1 |
154 |
214 |
35.98 |
154 |
49 |
5e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0477100-01 |
252 |
409 |
432 |
36.57 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3247 |
Augustus |
mRNA |
17407 |
23640 |
. |
+ |
. |
ID=Dca32093.1;Parent=Dca32093 |
| scaffold3247 |
Augustus |
exon |
17407 |
17697 |
. |
+ |
. |
ID=Dca32093.1.exon1;Parent=Dca32093.1 |
| scaffold3247 |
Augustus |
exon |
18159 |
18334 |
. |
+ |
. |
ID=Dca32093.1.exon2;Parent=Dca32093.1 |
| scaffold3247 |
Augustus |
exon |
23334 |
23385 |
. |
+ |
. |
ID=Dca32093.1.exon3;Parent=Dca32093.1 |
| scaffold3247 |
Augustus |
exon |
23515 |
23640 |
. |
+ |
. |
ID=Dca32093.1.exon4;Parent=Dca32093.1 |
