Dca32469.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3294)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32469.1 |
1 |
327 |
327 |
45.56 |
327 |
44 |
1e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
254 |
549 |
964 |
30.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32469.1 |
1 |
121 |
327 |
12.84 |
121 |
33 |
7e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
668 |
797 |
1428 |
9.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3294 |
Augustus |
mRNA |
50409 |
51513 |
. |
- |
. |
ID=Dca32469.1;Parent=Dca32469 |
| scaffold3294 |
Augustus |
exon |
50409 |
51254 |
. |
- |
. |
ID=Dca32469.1.exon1;Parent=Dca32469.1 |
| scaffold3294 |
Augustus |
exon |
51376 |
51513 |
. |
- |
. |
ID=Dca32469.1.exon2;Parent=Dca32469.1 |
