Carnation DB

Dca33785.1

Annotation

6-exons
f-1
sp|E0CR83_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g03160#GO:0016020#0F0P1C
sp|B9RJ73_RICCO#Auxin-induced protein 5NG4, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1031940#GO:0016020#0F0P1C
Repeat List (scaffold346)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33785.1	8	308	309	68.28	301	71	9e-127
Target_name	Start	End	Length	Cov(%)
sp\|E0CR83_VITVI	15	314	391	76.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33785.1	11	308	309	62.78	298	64	1e-111
Target_name	Start	End	Length	Cov(%)
AT1G21890.1	10	315	389	78.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold346	Augus-PASA	mRNA	104546	108620	.	+	.	ID=Dca33785.1;Parent=Dca33785
scaffold346	Augus-PASA	exon	104546	104736	.	+	.	ID=Dca33785.1.exon1;Parent=Dca33785.1
scaffold346	Augus-PASA	exon	104865	104927	.	+	.	ID=Dca33785.1.exon2;Parent=Dca33785.1
scaffold346	Augus-PASA	exon	105217	105333	.	+	.	ID=Dca33785.1.exon3;Parent=Dca33785.1
scaffold346	Augus-PASA	exon	107740	107983	.	+	.	ID=Dca33785.1.exon4;Parent=Dca33785.1
scaffold346	Augustus	exon	108164	108322	.	+	.	ID=Dca33785.1.exon5;Parent=Dca33785.1
scaffold346	Augustus	exon	108465	108620	.	+	.	ID=Dca33785.1.exon6;Parent=Dca33785.1