Carnation DB

Dca33786.1

Annotation

5-exons
f-1
sp|F6H0S4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g03080#GO:0016998#0F1P0C
AT1G21880.2 | Symbols: LYM1 | lysm domain GPI-anchored protein 1 precursor | chr1:7680689-7682526 FORWARD LENGTH=416
Repeat List (scaffold346)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33786.1	1	369	382	67.27	369	70	4e-141
Target_name	Start	End	Length	Cov(%)
sp\|F6H0S4_VITVI	42	406	418	87.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33786.1	1	374	382	64.13	374	65	6e-135
Target_name	Start	End	Length	Cov(%)
AT1G21880.2	43	414	416	89.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold346	Augustus	mRNA	110753	113329	.	-	.	ID=Dca33786.1;Parent=Dca33786
scaffold346	Augustus	exon	110753	111048	.	-	.	ID=Dca33786.1.exon1;Parent=Dca33786.1
scaffold346	Augustus	exon	111373	111404	.	-	.	ID=Dca33786.1.exon2;Parent=Dca33786.1
scaffold346	Augustus	exon	111494	111655	.	-	.	ID=Dca33786.1.exon3;Parent=Dca33786.1
scaffold346	Augustus	exon	111769	111886	.	-	.	ID=Dca33786.1.exon4;Parent=Dca33786.1
scaffold346	Augustus	exon	112789	113329	.	-	.	ID=Dca33786.1.exon5;Parent=Dca33786.1