Dca39183.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4229)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39183.1 |
66 |
310 |
425 |
21.88 |
245 |
36 |
2e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
7 |
263 |
1501 |
17.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39183.1 |
87 |
257 |
425 |
12.23 |
171 |
31 |
3e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
250 |
296 |
57.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4229 |
Augustus |
mRNA |
2934 |
5844 |
. |
- |
. |
ID=Dca39183.1;Parent=Dca39183 |
| scaffold4229 |
Augustus |
exon |
2934 |
3316 |
. |
- |
. |
ID=Dca39183.1.exon1;Parent=Dca39183.1 |
| scaffold4229 |
Augustus |
exon |
3401 |
4151 |
. |
- |
. |
ID=Dca39183.1.exon2;Parent=Dca39183.1 |
| scaffold4229 |
Augustus |
exon |
5614 |
5709 |
. |
- |
. |
ID=Dca39183.1.exon3;Parent=Dca39183.1 |
| scaffold4229 |
Augustus |
exon |
5797 |
5844 |
. |
- |
. |
ID=Dca39183.1.exon4;Parent=Dca39183.1 |
