Carnation DB

Dca40163.1

Annotation

9-exons
f-1
sp|B9GUF0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_798717#GO:0004077;GO:0006464#1F1P0C
AT2G25710.1 | Symbols: HCS1 | holocarboxylase synthase 1 | chr2:10952719-10955061 FORWARD LENGTH=367
Repeat List (scaffold439)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40163.1	3	326	327	65.13	324	65	1e-128
Target_name	Start	End	Length	Cov(%)
sp\|B9GUF0_POPTR	6	332	333	98.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40163.1	1	326	327	62.07	326	62	2e-124
Target_name	Start	End	Length	Cov(%)
AT2G25710.1	39	367	367	89.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold439	Augus-PASA	mRNA	7881	11580	.	+	.	ID=Dca40163.1;Parent=Dca40163
scaffold439	Augus-PASA	exon	7881	8143	.	+	.	ID=Dca40163.1.exon1;Parent=Dca40163.1
scaffold439	Augus-PASA	exon	8245	8306	.	+	.	ID=Dca40163.1.exon2;Parent=Dca40163.1
scaffold439	Augus-PASA	exon	9053	9201	.	+	.	ID=Dca40163.1.exon3;Parent=Dca40163.1
scaffold439	Augus-PASA	exon	9384	9504	.	+	.	ID=Dca40163.1.exon4;Parent=Dca40163.1
scaffold439	Augus-PASA	exon	9668	9823	.	+	.	ID=Dca40163.1.exon5;Parent=Dca40163.1
scaffold439	Augus-PASA	exon	10255	10300	.	+	.	ID=Dca40163.1.exon6;Parent=Dca40163.1
scaffold439	Augus-PASA	exon	10819	10885	.	+	.	ID=Dca40163.1.exon7;Parent=Dca40163.1
scaffold439	Augus-PASA	exon	11043	11119	.	+	.	ID=Dca40163.1.exon8;Parent=Dca40163.1
scaffold439	Augus-PASA	exon	11538	11580	.	+	.	ID=Dca40163.1.exon9;Parent=Dca40163.1