Carnation DB

Dca44488.1

Annotation

9-exons
f-1
sp|C6TDY7_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#unknown#0F0P0C
sp|D7TQA7_VITVI#Type II peroxiredoxin 2#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g03130#GO:0004601;GO:0051920#2F0P0C
Repeat List (scaffold512)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44488.1	1	254	258	64.72	254	66	6e-93
Target_name	Start	End	Length	Cov(%)
sp\|C6TDY7_SOYBN	1	256	256	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44488.1	30	253	258	57.36	224	67	1e-84
Target_name	Start	End	Length	Cov(%)
AT2G37240.1	34	247	248	86.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold512	Augus-PASA	mRNA	102932	108115	.	-	.	ID=Dca44488.1;Parent=Dca44488
scaffold512	Augus-PASA	exon	102932	103003	.	-	.	ID=Dca44488.1.exon1;Parent=Dca44488.1
scaffold512	Augus-PASA	exon	103412	103472	.	-	.	ID=Dca44488.1.exon2;Parent=Dca44488.1
scaffold512	Augus-PASA	exon	104356	104447	.	-	.	ID=Dca44488.1.exon3;Parent=Dca44488.1
scaffold512	Augus-PASA	exon	104582	104661	.	-	.	ID=Dca44488.1.exon4;Parent=Dca44488.1
scaffold512	Augus-PASA	exon	105039	105075	.	-	.	ID=Dca44488.1.exon5;Parent=Dca44488.1
scaffold512	Augus-PASA	exon	105225	105284	.	-	.	ID=Dca44488.1.exon6;Parent=Dca44488.1
scaffold512	Augus-PASA	exon	107316	107361	.	-	.	ID=Dca44488.1.exon7;Parent=Dca44488.1
scaffold512	Augus-PASA	exon	107476	107617	.	-	.	ID=Dca44488.1.exon8;Parent=Dca44488.1
scaffold512	Augus-PASA	exon	107929	108115	.	-	.	ID=Dca44488.1.exon9;Parent=Dca44488.1