Dca45557.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold5355)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45557.1 |
523 |
631 |
631 |
13.31 |
109 |
78 |
5e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
562 |
670 |
1501 |
7.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45557.1 |
526 |
631 |
631 |
9.03 |
106 |
54 |
3e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
254 |
359 |
707 |
14.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5355 |
Augustus |
mRNA |
24482 |
26630 |
. |
- |
. |
ID=Dca45557.1;Parent=Dca45557 |
| scaffold5355 |
Augustus |
exon |
24482 |
25286 |
. |
- |
. |
ID=Dca45557.1.exon1;Parent=Dca45557.1 |
| scaffold5355 |
Augustus |
exon |
25415 |
25590 |
. |
- |
. |
ID=Dca45557.1.exon2;Parent=Dca45557.1 |
| scaffold5355 |
Augustus |
exon |
25716 |
26630 |
. |
- |
. |
ID=Dca45557.1.exon3;Parent=Dca45557.1 |
