Dca45558.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold5355)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45558.1 |
9 |
450 |
472 |
44.27 |
442 |
43 |
9e-103
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
153 |
644 |
1501 |
32.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45558.1 |
182 |
458 |
472 |
17.79 |
277 |
30 |
5e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
61 |
341 |
707 |
39.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5355 |
Augustus |
mRNA |
30806 |
32380 |
. |
- |
. |
ID=Dca45558.1;Parent=Dca45558 |
| scaffold5355 |
Augustus |
exon |
30806 |
31964 |
. |
- |
. |
ID=Dca45558.1.exon1;Parent=Dca45558.1 |
| scaffold5355 |
Augustus |
exon |
32121 |
32380 |
. |
- |
. |
ID=Dca45558.1.exon2;Parent=Dca45558.1 |
