Dca45894.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold5424)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45894.1 |
1 |
495 |
498 |
54.61 |
495 |
50 |
2e-131
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
377 |
877 |
1717 |
29.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45894.1 |
158 |
252 |
498 |
6.62 |
95 |
35 |
3e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
191 |
192 |
48.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5424 |
Augustus |
mRNA |
3665 |
5271 |
. |
+ |
. |
ID=Dca45894.1;Parent=Dca45894 |
| scaffold5424 |
Augustus |
exon |
3665 |
4420 |
. |
+ |
. |
ID=Dca45894.1.exon1;Parent=Dca45894.1 |
| scaffold5424 |
Augustus |
exon |
4531 |
5271 |
. |
+ |
. |
ID=Dca45894.1.exon2;Parent=Dca45894.1 |
