Dca45962.1
Annotation
- 2-exons
- f-1
- sp|Q53KY4_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy sub-class#Oryza sativa subsp japonica (Rice)#OrderedLocusNames=LOC_Os11g25590#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- Repeat List (scaffold5439)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45962.1 |
2 |
114 |
114 |
72.8 |
113 |
69 |
5e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q53KY4_ORYSJ |
613 |
733 |
1333 |
9.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45962.1 |
2 |
114 |
114 |
49.12 |
113 |
38 |
5e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
300 |
447 |
707 |
20.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5439 |
Augustus |
mRNA |
9041 |
9490 |
. |
+ |
. |
ID=Dca45962.1;Parent=Dca45962 |
| scaffold5439 |
Augustus |
exon |
9041 |
9231 |
. |
+ |
. |
ID=Dca45962.1.exon1;Parent=Dca45962.1 |
| scaffold5439 |
Augustus |
exon |
9337 |
9490 |
. |
+ |
. |
ID=Dca45962.1.exon2;Parent=Dca45962.1 |
