Dca47079.1
Annotation
- 3-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold569)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47079.1 |
1 |
378 |
382 |
63.87 |
378 |
54 |
3e-130
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
483 |
939 |
1553 |
29.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47079.1 |
1 |
341 |
382 |
38.48 |
341 |
37 |
1e-70
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
137 |
534 |
707 |
56.29 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold569 |
Augustus |
mRNA |
27576 |
28967 |
. |
- |
. |
ID=Dca47079.1;Parent=Dca47079 |
| scaffold569 |
Augustus |
exon |
27576 |
27701 |
. |
- |
. |
ID=Dca47079.1.exon1;Parent=Dca47079.1 |
| scaffold569 |
Augustus |
exon |
27787 |
28058 |
. |
- |
. |
ID=Dca47079.1.exon2;Parent=Dca47079.1 |
| scaffold569 |
Augustus |
exon |
28217 |
28967 |
. |
- |
. |
ID=Dca47079.1.exon3;Parent=Dca47079.1 |
