Dca47195.1
Annotation
- 4-exons
- f-1
- sp|A5CBQ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013115#GO:0003676;GO:0015074#1F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold571)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47195.1 |
269 |
1308 |
1309 |
46.37 |
1040 |
56 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5CBQ4_VITVI |
116 |
1177 |
1178 |
90.15 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47195.1 |
287 |
1299 |
1309 |
27.65 |
1013 |
34 |
1e-147
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
378 |
1389 |
1401 |
72.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold571 |
Augustus |
mRNA |
30615 |
34918 |
. |
+ |
. |
ID=Dca47195.1;Parent=Dca47195 |
| scaffold571 |
Augustus |
exon |
30615 |
31122 |
. |
+ |
. |
ID=Dca47195.1.exon1;Parent=Dca47195.1 |
| scaffold571 |
Augustus |
exon |
31273 |
31354 |
. |
+ |
. |
ID=Dca47195.1.exon2;Parent=Dca47195.1 |
| scaffold571 |
Augustus |
exon |
31480 |
33805 |
. |
+ |
. |
ID=Dca47195.1.exon3;Parent=Dca47195.1 |
| scaffold571 |
Augustus |
exon |
33905 |
34918 |
. |
+ |
. |
ID=Dca47195.1.exon4;Parent=Dca47195.1 |
