Carnation DB

Dca47669.1

Annotation

5-exons
f-1
sp|A6YGE4_CARPA#Hypersensitive-induced response protein#Carica papaya (Papaya)#unknown#GO:0016020#0F0P1C
Repeat List (scaffold581)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47669.1	1	283	285	88.42	283	90	2e-150
Target_name	Start	End	Length	Cov(%)
sp\|A6YGE4_CARPA	1	283	285	99.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47669.1	1	285	285	86.66	285	87	1e-148
Target_name	Start	End	Length	Cov(%)
Os05t0591900-07	1	285	289	98.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold581	Augustus	mRNA	111640	112961	.	+	.	ID=Dca47669.1;Parent=Dca47669
scaffold581	Augustus	exon	111640	111828	.	+	.	ID=Dca47669.1.exon1;Parent=Dca47669.1
scaffold581	Augus-PASA	exon	112003	112123	.	+	.	ID=Dca47669.1.exon2;Parent=Dca47669.1
scaffold581	Augus-PASA	exon	112224	112315	.	+	.	ID=Dca47669.1.exon3;Parent=Dca47669.1
scaffold581	Augus-PASA	exon	112415	112511	.	+	.	ID=Dca47669.1.exon4;Parent=Dca47669.1
scaffold581	Augus-PASA	exon	112603	112961	.	+	.	ID=Dca47669.1.exon5;Parent=Dca47669.1