Dca47670.1
Annotation
- 4-exons
- f-1
- sp|A5ACS2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0108g00030#GO:0030570#1F0P0C
- Os06t0583900-01 Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment).
- Repeat List (scaffold581)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47670.1 |
14 |
433 |
433 |
60.96 |
420 |
63 |
3e-160
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5ACS2_VITVI |
19 |
439 |
439 |
95.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47670.1 |
5 |
433 |
433 |
56.81 |
429 |
57 |
2e-142
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0583900-01 |
17 |
448 |
449 |
96.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold581 |
Augustus |
mRNA |
117610 |
119503 |
. |
+ |
. |
ID=Dca47670.1;Parent=Dca47670 |
| scaffold581 |
Augustus |
exon |
117610 |
117794 |
. |
+ |
. |
ID=Dca47670.1.exon1;Parent=Dca47670.1 |
| scaffold581 |
Augustus |
exon |
117971 |
118622 |
. |
+ |
. |
ID=Dca47670.1.exon2;Parent=Dca47670.1 |
| scaffold581 |
Augustus |
exon |
118893 |
119135 |
. |
+ |
. |
ID=Dca47670.1.exon3;Parent=Dca47670.1 |
| scaffold581 |
Augustus |
exon |
119282 |
119503 |
. |
+ |
. |
ID=Dca47670.1.exon4;Parent=Dca47670.1 |
