Dca48843.1
Annotation
- 2-exons
- f-1
- sp|A9PE20_POPTR#Methyl binding domain protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=MBD903#GO:0005634;GO:0003677;GO:0008270#2F0P1C
- Repeat List (scaffold605)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48843.1 |
1 |
172 |
186 |
52.68 |
172 |
56 |
3e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PE20_POPTR |
3 |
178 |
182 |
96.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48843.1 |
20 |
156 |
186 |
43.54 |
137 |
60 |
4e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G63030.1 |
25 |
161 |
186 |
73.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold605 |
Augus-PASA |
mRNA |
43183 |
45150 |
. |
- |
. |
ID=Dca48843.1;Parent=Dca48843 |
| scaffold605 |
Augus-PASA |
exon |
43183 |
43704 |
. |
- |
. |
ID=Dca48843.1.exon1;Parent=Dca48843.1 |
| scaffold605 |
Augus-PASA |
exon |
45112 |
45150 |
. |
- |
. |
ID=Dca48843.1.exon2;Parent=Dca48843.1 |
