Dca4894.1
Annotation
- 4-exons
- f-1
- sp|Q2QTW2_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g18320#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1186)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4894.1 |
28 |
341 |
341 |
35.48 |
314 |
31 |
3e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QTW2_ORYSJ |
37 |
426 |
1226 |
31.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1186 |
Augustus |
mRNA |
88760 |
90456 |
. |
+ |
. |
ID=Dca4894.1;Parent=Dca4894 |
| scaffold1186 |
Augustus |
exon |
88760 |
88967 |
. |
+ |
. |
ID=Dca4894.1.exon1;Parent=Dca4894.1 |
| scaffold1186 |
Augustus |
exon |
89057 |
89452 |
. |
+ |
. |
ID=Dca4894.1.exon2;Parent=Dca4894.1 |
| scaffold1186 |
Augustus |
exon |
89545 |
89760 |
. |
+ |
. |
ID=Dca4894.1.exon3;Parent=Dca4894.1 |
| scaffold1186 |
Augustus |
exon |
90251 |
90456 |
. |
+ |
. |
ID=Dca4894.1.exon4;Parent=Dca4894.1 |
