Dca4895.1
Annotation
- 2-exons
- f-1
- sp|Q2R1L3_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g38820#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- Repeat List (scaffold1186)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4895.1 |
1 |
273 |
273 |
71.06 |
273 |
59 |
4e-107
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R1L3_ORYSJ |
970 |
1299 |
1710 |
19.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4895.1 |
2 |
253 |
273 |
39.56 |
252 |
34 |
3e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
71 |
394 |
591 |
54.82 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1186 |
Augustus |
mRNA |
90496 |
91461 |
. |
+ |
. |
ID=Dca4895.1;Parent=Dca4895 |
| scaffold1186 |
Augustus |
exon |
90496 |
90598 |
. |
+ |
. |
ID=Dca4895.1.exon1;Parent=Dca4895.1 |
| scaffold1186 |
Augustus |
exon |
90743 |
91461 |
. |
+ |
. |
ID=Dca4895.1.exon2;Parent=Dca4895.1 |
